Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_12770 |
Symbol | |
ID | 7313598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | - |
Start bp | 1370054 |
End bp | 1370803 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643611717 |
Product | conserved hypothetical protein TIGR00046 |
Protein accession | YP_002509022 |
Protein GI | 220932114 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.000425435 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCACCGTT TTTTTGTATC TGAAGAACAA ATACGGGATG ATCTGGTAAT AATAAAAGGG AATGATTATA ACCATATTGT TAATTCTTTA CGGCTGAATC CGGGTGATAA ACTCATTGTC TGCCCCGGAA ACTGTCGGGA TTATGTTGCT ACTATTGAGG AGATAAAGGA AAACCAGATA ACCGGGAAAA TAATTAAAGA ATATAAAAAC AGGAATGAAC CGTCATTAAA TATTACCCTG GCCCAGGCTC TTCCTAAAAA AAGAAAAATG GATTTAGTTA TCCAGAAGGC AACTGAAATC GGGGTTCGTA GTATTATCCC CCTTAAAACA ACAAGGACTA TAGTTAGATT AAATAAAAAA AAAGAACGAA AGAAAACCGA TAGATGGCAA AAGATTGCTA AAGAAGCTGC CAAACAGTCG GGGCGGGGAA GGATACCCAC AGTTGAAAGG GTATATAGTC TCAAAGAGTT AACGCAATTT AAATCTAATT TTGATCTTAT AATAATTCCC TGGGAAGAGG AACAGGGTAA AAACTTAAAA AACGTTTTAT CAACAGTAAA TGTCAGTGAA ATCAGTAAGA TATTAGTGAT AATCGGTCCT GAAGGGGGCT TTCCCCCGGA GGAAATTAAG TTTATTGAAC AACTTGGGGG AATTCCTATA ACTTTAGGAC CACGTATCTT GAGGACTGAA ACTGCTGGAC TGGTGGTATT GACCATGCTA TTATATGAAT CAGGTGATTT AGGGGGCTGA
|
Protein sequence | MHRFFVSEEQ IRDDLVIIKG NDYNHIVNSL RLNPGDKLIV CPGNCRDYVA TIEEIKENQI TGKIIKEYKN RNEPSLNITL AQALPKKRKM DLVIQKATEI GVRSIIPLKT TRTIVRLNKK KERKKTDRWQ KIAKEAAKQS GRGRIPTVER VYSLKELTQF KSNFDLIIIP WEEEQGKNLK NVLSTVNVSE ISKILVIIGP EGGFPPEEIK FIEQLGGIPI TLGPRILRTE TAGLVVLTML LYESGDLGG
|
| |