| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_12610 |
|---|
| Symbol | |
|---|
| ID | 7313582 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | - |
|---|
| Start bp | 1354728 |
|---|
| End bp | 1355897 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 643611701 |
|---|
| Product | putative stage IV sporulation YqfD |
|---|
| Protein accession | YP_002509006 |
|---|
| Protein GI | 220932098 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02876] sporulation protein YqfD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 67 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCTGAGAA AAATAATGAA TTTTATCCAG GGTTATCTTT TAATTGAAAT TACCGGGAAT
GCCTTGGAAA GGTTTATAAA CCAGATCATT GAAAAGGAAA TTATTCTGTG GGATGTTAAG
CGTGAAAACA AATCCAGATA TCTGGCCAAA ATAGATATAA AGAATTTTAA TAAATTAAGA
CCTCTTGTCA GGAAACGGAT GTGCCGGGTC AGGATAATGG ATAAATGTGG CCTTCCTTTC
CTTATTACCA GAGCAAAACA GAATTATTTT CTTTTGGTAG GTTTTTTAAT ATTATTTTTA
ATACTTTATG TTGGCTCAAA TTTTTTATTA TTTATTGGCA TTGAGGGTCT TGAAAAAATA
CCTGAAGAAA GGATTATTAA CATCCTTAAA GAAGAAGGGG TAAGACCCGG AATTTTAAAA
AACAGGGTTA ATCCTGAACG GCTGGAAAGC ATTATTCTGA AGGAAGAGCC TCGCCTGGCC
TGGGTGGATG TTAAATGGCA GGGAAGCAGG CTTTTTATTG AGACCGTTGA AAAGAAAATA
GTAGAAAAAA CAGAACCCGG ACACCTCATT GCAGCTAAAA GTGGAGTGAT AAAAGAAATC
ATTGTTTTAA AGGGAAAAGC GGTTGTTGAA GAAGGAGATA CGGTATTATC AGGTCAACCT
CTTATTATCA AGCGTGATAA AAACGAGAGG GCCCGGGGTA TTGTCAGGGC TTATGTCTGG
TATGAGGCAG AAGGTAAGGT CCCTGTAAAT TATAAAGAGG TAAAATATAC TGGAAAATCT
AAAACTATTT ATAGATTGAA GTTTGGAGAA TATGGGTTAT CAATTCCATG GAATAAACCT
GACTGGAAGT CTTACAGGAT AAGAAAAGAA ATTAAATCTC TCCCGGAATG GAGGAATCTC
AGCATTCCTA TAGAATTAAT TAGAGAAGAG TACAGGCAGA TAAAGTATGT CAAAGGAAAA
AGAAGCTATA AGACGGCGCT TTTTCTGGCT AAAGAAAAAG CCTTAAAAAA AATACTCAGG
GAGATAGATT CCGGGACTAT TATTTTAAAT GTTAACTCCC GGGTTATAGA AACCAAAAAT
GAAAATGTGG TTAAAATTAA ATTATTAATC CAGACTGAAG AAAATATAGC TAAAATTACA
GACGAGGAGG GTCCTGGTGG TAGCGACTGA
|
|---|
| Protein sequence | MLRKIMNFIQ GYLLIEITGN ALERFINQII EKEIILWDVK RENKSRYLAK IDIKNFNKLR
PLVRKRMCRV RIMDKCGLPF LITRAKQNYF LLVGFLILFL ILYVGSNFLL FIGIEGLEKI
PEERIINILK EEGVRPGILK NRVNPERLES IILKEEPRLA WVDVKWQGSR LFIETVEKKI
VEKTEPGHLI AAKSGVIKEI IVLKGKAVVE EGDTVLSGQP LIIKRDKNER ARGIVRAYVW
YEAEGKVPVN YKEVKYTGKS KTIYRLKFGE YGLSIPWNKP DWKSYRIRKE IKSLPEWRNL
SIPIELIREE YRQIKYVKGK RSYKTALFLA KEKALKKILR EIDSGTIILN VNSRVIETKN
ENVVKIKLLI QTEENIAKIT DEEGPGGSD
|
|---|
| |