Gene Hore_12490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_12490 
Symbol 
ID7313570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1342870 
End bp1343571 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content44% 
IMG OID643611689 
Productdeoxyribose-phosphate aldolase 
Protein accessionYP_002508994 
Protein GI220932086 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0274] Deoxyribose-phosphate aldolase 
TIGRFAM ID[TIGR00126] deoxyribose-phosphate aldolase 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATCA AACCTCGTGA CATGGCAAAA ATGATCGACC ATACCAACTT GAAACCGACT 
GCTACCGTTG AAGATATTAA AAAATTATGT GATGAGGCCA GGGAATATGA GTTTGCTTCT
GTCTGTGTCA ATCCTATTTT TGTTCCTCTG GCCAGCAAGT TGCTGGAAGA TAGTTCAGTT
AAAGTAACTA CTGTAGTTGG TTTTCCACTG GGCTCAACTA CCACCGAGAC CAAGGCCTTT
GAAACAAGGA ATGTGATTAA AAATGGAGCC CAGGAAATAG ACATGGTAAT GAATCTCGGA
GCCTTTAAAT CAGAGGCATA TGACCTTGTA AAGGCTGACA TAAAGGCAGT AGTAGATGCT
ACCAAAACCG CAGGTGTTAC TTCAGATATT ATTGTCAAGG TTATAATTGA AACCTGCTAT
CTGGATAATG AGGAAATAGC AAAGGCCTGT GAAATTGCAA AGGAGGCCGG GGCTGATTTT
GTAAAAACCT CAACTGGATT TGGCTCTGAT GGGGCCAGGG AAGATGATGT CAGCCTCATG
AGGAAGACTG TAGGTAGAGA GGTTGGGGTT AAAGCAGCCG GAGGGATCCG GACTTTTGAT
AAAGCACTGG CTATGCTTGA TGCAGGGGCC AACAGGATTG GTACCAGTTC CGGAGTAGCT
ATTGTTACCG GCGAAACTGA TGACGGGGAT AAAGAGTATT AA
 
Protein sequence
MAIKPRDMAK MIDHTNLKPT ATVEDIKKLC DEAREYEFAS VCVNPIFVPL ASKLLEDSSV 
KVTTVVGFPL GSTTTETKAF ETRNVIKNGA QEIDMVMNLG AFKSEAYDLV KADIKAVVDA
TKTAGVTSDI IVKVIIETCY LDNEEIAKAC EIAKEAGADF VKTSTGFGSD GAREDDVSLM
RKTVGREVGV KAAGGIRTFD KALAMLDAGA NRIGTSSGVA IVTGETDDGD KEY