| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_12380 |
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| Symbol | |
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| ID | 7314654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | - |
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| Start bp | 1329459 |
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| End bp | 1330958 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 643611677 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002508983 |
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| Protein GI | 220932075 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.00534046 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCATCA AGAAGGTAAG CAGATATAAG ATTATTAAAT CAGTATTTGA TTTTTTTCTA
TCATTTGATC ATGAGGCATC AAACCATAAA ATTATAAAAG ATGTCAATGA TTTCTGTTAT
AAAATGTTGA ATGTGAAATA TACCGGTCTA TATATAGATG ATGAAGGTAG AAATGAAGTA
ATAAGTTTGA AGCAGGATAT AACCAGGATG GAGTTCAATT CAGAGTTGAC AGATAAAATT
AAAAGAGATA ATAGAATTTA CGGGGGGGAA ATAAGTAAAG ATTTTACCCT GATTCCGCAG
TTTGAAGCAG AAAACAGATT AAAGTATTTG TTAGTTATTC CTTTAACTAA CAAGAATAAA
CACTTCGGAT TTTTGTTTTT TTATGGAACG GATCCACAGA CCTTTAATGA CTTTTCTGTG
AAAGTTTTAA AATTGCTTAC CAAAGTATTA TCCCTTACAA TAGGAGAAAA GAAACTTTAC
CGGGAAATGG AGCAGAGGGT TGCCGAACTT ATAACCCTTC AAAATGTCAG TAATTTTGTT
AATGCAACCC TTGATTTTGA AAAATTACTG GATGTTTCCC TGGATGCTCT GGTAGGCCTT
ATTGGGCTGA GAACCTGTTC AATAGTGTTA TTTACAGATA AGCTTTTTGA TGACATCTAT
ACCAGGAAAC AAAATACCCT GATAGCTTCC CTGGATATGA GTAAAGAAAT TGTTTTGGAC
CTATCATCCG GGATTTATAA AGAGTTATCC AGAAAAAAGA AAGTTATTGC CGGTAAAGTA
TCTTTTGATG ATGATTTAAG TAAAATTATA CCCCTTGATA ATATTGAAGA GGGTAAAGAA
ATTGAATATA TAATTGTCCC GGTAACCAGA GGTAAGGAAC TGATAGGGTC TATAAATATT
TTTTCAATGG ATAAGGGTCA TTTACCTATT TTACAACACA GTTTTCTCGA ATCTTTTGCC
AACCAGTTCA GTGTGGCTTT ACAAAATGCT TTATTATATA AAAAACAGGA AGAAATGGCC
AACAGGGATG GTTTAACCGG GTTATATAAC CATGCTTATT TCCAGAACAG GTTACATCTT
TTATTAAAAC AGGAAAATAA ACATCCATTA ACCCTCATAA TTATGGATAT TGATAATTTC
AAACAGGTTA ACGATAGATT TGGACATCTT GTTGGTGATA AAGTTTTGAA AGAACTTGCT
CACCTGTTAA AACATAATTT GAGGGAGGGT GATTTAATAG CAAGATACGG TGGAGAAGAA
TTTGCTATAA TTTTGCCGGA AACTGAACTG AAACAGGGAG AATTTATAGC TAAAAGATTA
AGAAAATTGA TATCAGATAA TGAAATTGTA CTTGATAATA ATAGATCACT ATATATAACA
GTAAGTATAG GTGTGGCTCA ATATAATAAA AAATGGAGTC AGGAAGAATT TATTGATAAA
GCGGATCAGG CTCTTTATAA AGCAAAGGAA GCCGGTAAAA ACAGGGTTAC ACTTGCTTAA
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| Protein sequence | MAIKKVSRYK IIKSVFDFFL SFDHEASNHK IIKDVNDFCY KMLNVKYTGL YIDDEGRNEV
ISLKQDITRM EFNSELTDKI KRDNRIYGGE ISKDFTLIPQ FEAENRLKYL LVIPLTNKNK
HFGFLFFYGT DPQTFNDFSV KVLKLLTKVL SLTIGEKKLY REMEQRVAEL ITLQNVSNFV
NATLDFEKLL DVSLDALVGL IGLRTCSIVL FTDKLFDDIY TRKQNTLIAS LDMSKEIVLD
LSSGIYKELS RKKKVIAGKV SFDDDLSKII PLDNIEEGKE IEYIIVPVTR GKELIGSINI
FSMDKGHLPI LQHSFLESFA NQFSVALQNA LLYKKQEEMA NRDGLTGLYN HAYFQNRLHL
LLKQENKHPL TLIIMDIDNF KQVNDRFGHL VGDKVLKELA HLLKHNLREG DLIARYGGEE
FAIILPETEL KQGEFIAKRL RKLISDNEIV LDNNRSLYIT VSIGVAQYNK KWSQEEFIDK
ADQALYKAKE AGKNRVTLA
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