| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_12290 |
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| Symbol | |
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| ID | 7313930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | - |
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| Start bp | 1322662 |
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| End bp | 1323783 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643611668 |
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| Product | queuine tRNA-ribosyltransferase |
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| Protein accession | YP_002508974 |
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| Protein GI | 220932066 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00000356741 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCATTA GTTTCAATCT ATTACATCGA GAGATAAACA CCCGGGCCCG GCTGGGAAAG
CTCAAAACAC CACATGGTGA TATAGATACT CCTATTTTTA TGCCGGTAGG AACCCAGGCT
ACAGTTAAAT CTATGACTCC TGATGAATTA GAGAATATTA AGGCCCAGAT TATTCTATCA
AATACATATC ACCTTTACCT GCGGCCAGGT TCGAGTTTGA TAGATGAGGC TGGAGGGCTC
CATAACTTTA TGAACTGGCA GAAACCAATT TTAACAGATA GTGGGGGCTT TCAGGTATTT
AGTCTATCTG ACCTCAGAGA GATAAAAGAA GAAGGAGTTT ATTTTAGGTC TCACCTTGAT
GGTTCCAGGC ATTTTATATC CCCTGAAAAG GCTATTCAAA TTCAGATGGA ACTGGGAGCG
GATATTATCA TGGCTTTTGA TGAATGCCCT CCCTATCCCA GTGATTATGA TTATGTGGCC
CGGTCCCTTG AAAGAACAGT CAGGTGGGCA AGGCGCTGTA AAAAAGCCCA TGAGAGGGAG
GACCAGGCCC TGTTTGGAAT AATTCAGGGT GGTGTCTACC GGGATTTAAG AAAGCAAAGT
GTTGAAGCAT TGATAGATAT TGGTTTTCCG GGGTATGCTA TAGGTGGATT AAGCGTTGGT
GAGGAGAAAG AAAAGATGCT GGAGGTCCTG GACTTTACAG TACCATTGAT GCCAGAAAAT
AAACCCCGGT ATTTAATGGG TGTTGGTGCT CCTGAAGACC TTGTCGAAGG TGTTATCAGG
GGGGTTGATA TGTTTGACTG TGTTTTACCG ACCAGAATTG CCAGGCACGG GACTGTCTTT
ACCAGTCAGG GCCGGCTAAC TGTCAGGAAT GCCGGGTATG AGAGAGATTT TACACCCCTT
GATCCCGAGT GTGATTGTTA TGTCTGTAAA AACTATACCC GGGCCTATAT CCGCCACTTA
ATAAAAAGAA AAGAAATCCT TGGTGTAAGA TTGACTACCT ACCATAACCT ATATTTTCTC
TTATCTTTGA TGGAGAAAAT AAGGGGAGCT ATAAAGGAAG ACGCCCTGCT TGAATTTAGA
GATGAATTCC TTAGAAAATA TTTAAATAAA GCCTCAATTT AG
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| Protein sequence | MSISFNLLHR EINTRARLGK LKTPHGDIDT PIFMPVGTQA TVKSMTPDEL ENIKAQIILS
NTYHLYLRPG SSLIDEAGGL HNFMNWQKPI LTDSGGFQVF SLSDLREIKE EGVYFRSHLD
GSRHFISPEK AIQIQMELGA DIIMAFDECP PYPSDYDYVA RSLERTVRWA RRCKKAHERE
DQALFGIIQG GVYRDLRKQS VEALIDIGFP GYAIGGLSVG EEKEKMLEVL DFTVPLMPEN
KPRYLMGVGA PEDLVEGVIR GVDMFDCVLP TRIARHGTVF TSQGRLTVRN AGYERDFTPL
DPECDCYVCK NYTRAYIRHL IKRKEILGVR LTTYHNLYFL LSLMEKIRGA IKEDALLEFR
DEFLRKYLNK ASI
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