| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_12210 |
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| Symbol | |
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| ID | 7313922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | - |
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| Start bp | 1314476 |
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| End bp | 1316920 |
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| Gene Length | 2445 bp |
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| Protein Length | 814 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 643611660 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | YP_002508966 |
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| Protein GI | 220932058 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000000495428 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAA AATGGCAGTT TATTAAACAG AAACTGGATG GTTCTTTAAA TGATCTGGAA
CCAGTTTTAC AATCCATCCT TTATAGCCGG GGGATTACTG ACAGGGACGA AATAAACCGG
TTTTTATCCT GCCGTATTCA GGATCTTCAT TCCCCCTTTT TAATGAAAGA TATGGGAAAA
GCAGTGGACC GGATTTTAAC GGCCATTGAA AGTGGTGAGA AGATAATAGT ATATGGGGAT
TATGATGTTG ATGGGATAAC CTCAACTGCC CTTCTTTTTT TATATTTTAA AAAAAGGCTT
GGTTATGAAG TAGATTATTA TCTTCCCAAT CGTTTAAAAG AAGGTTATGG TTTAAATAAA
GAAGCCCTCG ATAAAATAAT AAATAAAAAC TATGATCTGA TGTTAACTGT TGATTGTGGG
ATAAGTGGCC TGGAAGAAGT GGAGTATGCT ACGCGGAAGG GTCTGGAGGT AATAGTTACT
GATCACCATC AGCCCGCAAA AAAGCTTCCC CCAGCTATAG CTGTACTGGA TCCTCACCGT
AAAGATGACA AATACCCTTT TAAATACCTG GCGGGAGTAG GTGTTGCCTT TAAGTTGTGT
CAGGCTCTTG AAAAAGAGAT TAAAGGACAT GAGATTTCTG ATTTTTTATT ACGGTTAATA
GATATTGTTT CCCTGGGTAG TATCGCTGAT ATAGTCCCCT TACTTGGTGA AAACAGAATT
ATCGTGAAAC GGGGGTTAAG TGAACTTAAT GATACTTCTA ATAAAGGGTT AAGGGTGTTA
ATGGATAAGT TAAGCCTGGA TGGTAAAGAT TTAAATGCAG GCCATATCGG TTATATTATG
GCCCCACCCT TAAATGCGGC GGGAAGGATG GAAGACCCTT CTCTGGGGAT TGAGTTATTG
ACCACTGACT CCATTGATAA AGCAAAAGAG ATAGCTAACA GGTTAATAAA TTTAAACAAG
AGCAGACAGG CTGAAGAAGA AGAAATCTTT GAAGATGCAG TAAAAATGAT CGAAAAAACT
GTTGATTTAA ATAAAGATAA GGGGATAGTT CTGGCCTCTC CTGACTGGCA TCACGGGGTA
ATAGGGATAG TTGCTTCACG GCTGGTTGAA AAGTATTATC GTCCTGTTAT TATGATTTCC
CTTGAAGACG GTATTGGCAA AGGGTCCTGT CGTAGTATCG AAGGGCTGAA TATTTATAAA
GCCCTGGATT TTTGCTCTAG TTATCTACTT TCCTATGGGG GGCACGAGCA GGCAGCTGGT
TTAGCTATAA ATAAAGAGGA TATAGAACAG TTCCGGGATA CTTTTCTTGA TTATGTGGAC
AGTGTTTTAT CACCAGAGGA TTTAATCCCA GTACTGAAAC TTGATAGTAT TTTAAAACCC
GGGCAAATTA ACTTAAATTT TTATAAAACC CTTAAACAAC TTGAGCCCTA TGGGGTAGGT
AATCCTAAAC CCAGATTTTT TCTGAGTAAT ATGCAATTTA ATAAACTGAG GACGGTGGGC
AGGGATGGAA AACATTTAAA ATTTACCCTT GATAAGGGTT TGAAGGGTAT TGGTTTTGAT
TTTGGAGATA AGCTTATAGA ATTTAAAAAT AAAAAGGTGG ACCTGGCTTT TTATTTAACC
TTGAACACCT GGAACGGTGC AGAAGAAGTG GAATTACAAT TACTTGACGT TAATGTAAAG
GAGAGTATTA ATTATTATCC CATCTATTTT AAGTCAGATG GTCTTGAGTT TGCTGATAAA
AGGGGTTGCC AGAATAGAAT TGAATATATA AATTCTTTAA GGGAAAACAA TTCTAAAATA
GCAGTATATT TAAATAATAC GGCTTTGTTA AAGACTCTCG AGCAAAAATT ATCCGAAACG
GGTCAAGTTT ATACTGGGGG AAGTGACATA TTAGAAGAGT TTAATAGACT TAAAAAAGGA
ATTTTCTTAT TTACCGGTAA TAGATTACCT GGAAATTTAA GTGTTAAAGA CCTGGTTTTC
TGGTCTCTAC CTTTTTCAAT TAAACAGATG AAGGGCATAA TTAACAGGGT ATCCCGAGAA
GATAAACTCA GGGTTCATTT GATCTATGGC AAAAAAGAAC ATGATCTGAA TGTTAAAATA
CTTAAAACAA TGTTACCAGA TAAAGAGTTT CTGCGTAAGT TTTATACTGT TTTACAGCAT
TATTACCAAA AAGAATTCCG GGTAAATGAA CTGATAGAAC GGCATTACCG TAATTATAAT
AAAAAATTAA TAGAAAAAAG CCTCTCCATA TTAAAGGAGA TTGAGTTAAT TAAATTTAAT
GGAAAGAGGG TTAGTATATT ACCTCGTCCT GCAGAAAAAC TGGACTTATC CCGGTCAATG
GGTTATAATG AAACTATTAC TGCAACAAGG GAATTTGGTA GTTTTTCCAC ACTTGCTTTT
GAGGATAATT TATTTAAATT AATTAATAAA TTGAATGAAG ATTAA
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| Protein sequence | MKKKWQFIKQ KLDGSLNDLE PVLQSILYSR GITDRDEINR FLSCRIQDLH SPFLMKDMGK
AVDRILTAIE SGEKIIVYGD YDVDGITSTA LLFLYFKKRL GYEVDYYLPN RLKEGYGLNK
EALDKIINKN YDLMLTVDCG ISGLEEVEYA TRKGLEVIVT DHHQPAKKLP PAIAVLDPHR
KDDKYPFKYL AGVGVAFKLC QALEKEIKGH EISDFLLRLI DIVSLGSIAD IVPLLGENRI
IVKRGLSELN DTSNKGLRVL MDKLSLDGKD LNAGHIGYIM APPLNAAGRM EDPSLGIELL
TTDSIDKAKE IANRLINLNK SRQAEEEEIF EDAVKMIEKT VDLNKDKGIV LASPDWHHGV
IGIVASRLVE KYYRPVIMIS LEDGIGKGSC RSIEGLNIYK ALDFCSSYLL SYGGHEQAAG
LAINKEDIEQ FRDTFLDYVD SVLSPEDLIP VLKLDSILKP GQINLNFYKT LKQLEPYGVG
NPKPRFFLSN MQFNKLRTVG RDGKHLKFTL DKGLKGIGFD FGDKLIEFKN KKVDLAFYLT
LNTWNGAEEV ELQLLDVNVK ESINYYPIYF KSDGLEFADK RGCQNRIEYI NSLRENNSKI
AVYLNNTALL KTLEQKLSET GQVYTGGSDI LEEFNRLKKG IFLFTGNRLP GNLSVKDLVF
WSLPFSIKQM KGIINRVSRE DKLRVHLIYG KKEHDLNVKI LKTMLPDKEF LRKFYTVLQH
YYQKEFRVNE LIERHYRNYN KKLIEKSLSI LKEIELIKFN GKRVSILPRP AEKLDLSRSM
GYNETITATR EFGSFSTLAF EDNLFKLINK LNED
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