Gene Hore_12170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_12170 
Symbol 
ID7313918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand- 
Start bp1310676 
End bp1311308 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content38% 
IMG OID643611656 
Productbeta-lactamase domain protein 
Protein accessionYP_002508962 
Protein GI220932054 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.000000000265397 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTTTTA AGAGAGTACC GGTCGGGGTC AATTATACTA ACTCCTATAT AATAGGACAG 
GAAGATGGTA ATGGAATAAT AGTAGACCCC GGTGATGAAG CACGGAAATT ACTTTCTTCA 
GTTGAGGATT TGAAGATTAA TTTGACAAAA ATAATCATTA CACATGCCCA TTTTGACCAT 
ATAGGAGCGG TAGAGTATTT GAGGGAAGAG ACCGGGGCTG AGGTTTTGAT ACATGAAAAG 
GAAAATGAAT TTTTGAAGGA TCCTGATAAA AATCTTTCCT TTCTTATCGG AAAGGAAATT 
GTTTGCCAGG GAGCAGATAC TTTACTGGGT GATGGTGATG TTATCGGGGT AAGTAATGGG 
CTGTCATTTG AAGTAATTTT TACTCCTGGA CATAGTCCCG GTGGTATCTG TCTCTATAAT 
AAGGAAGATA ACTATTTACT GAGTGGTGAT ACTATTTTTT TCAGGGGAGT AGGGAGAACT 
GATTTTCAAT TTGGAAATGA AAAAAAACTC ATACAGTCAA TTGAAAATAA AATCCTGATT 
CTCCCTGAAG ATACAGTTGT TTACCCGGGT CATGGTGCCA GCACGACTAT TGGTGATTTT 
AAAAATAATT ACTGGGAGAC AGCAAGGGGA TAA
 
Protein sequence
MIFKRVPVGV NYTNSYIIGQ EDGNGIIVDP GDEARKLLSS VEDLKINLTK IIITHAHFDH 
IGAVEYLREE TGAEVLIHEK ENEFLKDPDK NLSFLIGKEI VCQGADTLLG DGDVIGVSNG 
LSFEVIFTPG HSPGGICLYN KEDNYLLSGD TIFFRGVGRT DFQFGNEKKL IQSIENKILI 
LPEDTVVYPG HGASTTIGDF KNNYWETARG