Gene Hore_12160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_12160 
Symbol 
ID7313917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1309076 
End bp1310563 
Gene Length1488 bp 
Protein Length495 aa 
Translation table11 
GC content36% 
IMG OID643611655 
Productpeptidyl-prolyl cis-trans isomerase 
Protein accessionYP_002508961 
Protein GI220932053 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000838067 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAAAA AATTAAGGAA TTATAGTAAA TACATTATCT ATTTTGTGGT AGCTGCACTG 
GTTTTAACAG GAGCCTTTTT AGGTTTTGGA GCTTACAGGA ATAGTAGCCC GGCTGCTTCA
TCTGTTATAG ACCCTAATTA TATTGCCAGG GTAAATGATA CCAGTATACC CCGGGAAACC
TATTATCAAT ATTTACAGAA TAATGCCCAG TTTGCCCAGT TAAGCAGAGA ACAACAGGTT
CCCTATCGAT TAAATTTATT AAATCAATTA ATTGAACGGG AATTGCTTTT ACAGGAAGCA
GAAAAACTGG GTATTGAGTC AAACCCTACT GATAAAGAGG TAAAAGAACA GATTAATAAG
ATGCTGGAGG CTTATAATAT AACCGAAGAA AAGCTAAAGG AATTACTGGA TTCAAGGGGT
ATTAAATATG AAGATTTTAA AGAAGATATT AGACATAATA TCAAAACCAG CAATATAATC
AGAAAAACAA TAGAACACAC TTATAAAGGG GTTGAGGTTT CCGAGGATGA AATCAGGGAA
GCCTACGAAA AAGTTCGTCC AGCTTTAATA GCTGTAAATA TAGAAGGTGA AAAGAAAAAA
GAGGCCAGAG CAAAAATTGA AAAGGCCTTA AAGGAATTAG AAGAAGGGAA GGCCTTTGGT
GAAGTAGCAG CAAAATACTC TGATCTTAAA CTTAAAGACG GAGATTTAGG ATTTATTGGC
AGGAACAATG GATTTTTACC CCAGGAAGTA CTTGATAAAG CCTTTGAACT CGAAAAGGGC
AAAACCAGTG ATATTATTGA AGGAGAAAAA GGTTATTATA TTGTAAAAGT CATTGATAAA
AAACTGGCCA GGGGAGAAGA ATTTGAAAAG TCAAGAGAAG AATTGAAAGA CCAGCTCTTA
AAGCAAAAAC AGAATAGAAC CTATCAGAAC TGGCTCAGAG ATACCAAAAA GCAGGCCGAT
ATTGAGATAT ATGACCCCGT ATTGAATGGC TATAAAGCCT TACAGGAACA AAATTATACT
GAAGCTATTA ATGATTTCAA GATAGCTTTA GATTATAATG CTGCCCCCAT TGTTTATGTA
TACCTGGCCC GTGCTTATCA TGGTAAAGGA GATGACCAGG AGGCCATTAA GGTTTTTGAG
GAGGCCCTTA AAGATAATTC GGAGAGCTGG TATCTTCATT ACAATTTCGG TAATTTATAT
GCTGATATTG ATAAAAAAGA CCTGGCTATT AAAGAATTTA AAAAGGCTTC TGAACTGGCC
GGTAAAGATA TTCAGGCCCA TTACAGGCTC TATCTTGCTC TGGCTGGACT CGGGGCTAAA
GAAGAGGCCG AACATGAATC TGACATAGTT AAAAAACTAC AAAAAGAGAT TGAAGAGGCC
AGAAAGGAAC TTCAGGAGCA GGTAAATGAA TCAAGGGATA ATAATGAATT GAAATCAGAT
TCCGTTGAAA AAGCCCAGAC TAATAATGGC AGAACTGAAA ATAAATAA
 
Protein sequence
MFKKLRNYSK YIIYFVVAAL VLTGAFLGFG AYRNSSPAAS SVIDPNYIAR VNDTSIPRET 
YYQYLQNNAQ FAQLSREQQV PYRLNLLNQL IERELLLQEA EKLGIESNPT DKEVKEQINK
MLEAYNITEE KLKELLDSRG IKYEDFKEDI RHNIKTSNII RKTIEHTYKG VEVSEDEIRE
AYEKVRPALI AVNIEGEKKK EARAKIEKAL KELEEGKAFG EVAAKYSDLK LKDGDLGFIG
RNNGFLPQEV LDKAFELEKG KTSDIIEGEK GYYIVKVIDK KLARGEEFEK SREELKDQLL
KQKQNRTYQN WLRDTKKQAD IEIYDPVLNG YKALQEQNYT EAINDFKIAL DYNAAPIVYV
YLARAYHGKG DDQEAIKVFE EALKDNSESW YLHYNFGNLY ADIDKKDLAI KEFKKASELA
GKDIQAHYRL YLALAGLGAK EEAEHESDIV KKLQKEIEEA RKELQEQVNE SRDNNELKSD
SVEKAQTNNG RTENK