Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_11900 |
Symbol | |
ID | 7313888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | - |
Start bp | 1284645 |
End bp | 1285214 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 643611626 |
Product | 2'-5' RNA ligase |
Protein accession | YP_002508935 |
Protein GI | 220932027 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1514] 2'-5' RNA ligase |
TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 5.56695e-18 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGTTAT TTATTGCTGT TAATATTCCT GACAGGACAA AAGACCTTAT AGAACGTAAA CTCATCACTA TTAAAAGGCA GGTTAGACAG GGTATAAAAT GGGTCAAAAA AGATAACTGG CATATAACCC TGAAATTCAT AGGAGAGGTG GGGGATGAGA AAGTCTCCGA AATAAAGGAT TCTTTAGAAA GTATTTCAGA GAGAGTAAAA CCGTTTTCTA TTACAATTAA TGGCCCTGGG GCTTTTCCAG ATATCACAAG GCCAAGGGTA ATGTATTTAA GTATTAAAGA AGGTAGTGAT AACCTGACTT CTGTCTATAA ACTGTTAGAA AAAGACTTAA TAGATAGAGG ATTTAAAGCC GATGATAGGG AATTTACTCC ACATCTTACT CTGGCCCGGA GCAGGCGAAG AACTGATCTT AACCAGTTAT CTAAACGTCT TAATAAAGTA GTAGAAAGTC TTGAAGATTT TAAAGCCAGA GTAAATATAA ATAAACTGAG TTTGATGAAA AGTGAGCTTT ATAGAACAGG ACCAGTGTAT AAAGAAATAT TTTCAGTTTT TTTAGAATAA
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Protein sequence | MRLFIAVNIP DRTKDLIERK LITIKRQVRQ GIKWVKKDNW HITLKFIGEV GDEKVSEIKD SLESISERVK PFSITINGPG AFPDITRPRV MYLSIKEGSD NLTSVYKLLE KDLIDRGFKA DDREFTPHLT LARSRRRTDL NQLSKRLNKV VESLEDFKAR VNINKLSLMK SELYRTGPVY KEIFSVFLE
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