Gene Hore_11890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_11890 
Symbol 
ID7313887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1283476 
End bp1284549 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content42% 
IMG OID643611625 
ProductrecA protein 
Protein accessionYP_002508934 
Protein GI220932026 
COG category[L] Replication, recombination and repair 
COG ID[COG0468] RecA/RadA recombinase 
TIGRFAM ID[TIGR02012] protein RecA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000000128048 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTAATTT TGGCTAAAAA CGAGAAGGAA AAAGCTCTGG AGATGGCTGT AAAACGTATA 
GAAAAACAAT TTGGGCAGGG GTCTATTATG AAACTGGGAG AGGCTACTGC CCTTAATGTA
GAAGTTATTC CAACAGGTGC TTTACCCCTT GATTTAGCAT TAGGGGTAGG GGGTGTTCCC
AGGGGTAGAA TTATTGAAAT CTATGGACCT GAATCCTCGG GTAAGACTAC TCTGGCTTTA
CACATAATTG CTGAAGCCCA GAAACGCAAC GGGGTTGCTG CTTTTATTGA TGCTGAACAT
GCCCTTGATC CCAAATATTC AGAGAATCTG GGGGTTAACA TCGATAATTT ATTGATATCA
CAGCCAAATA ATGGTGAAGA AGCCCTGGAA ATAGCCGAAG CCCTCGTGCG CAGTAATGCC
ATCGATGTAA TTGTTATAGA TTCTGTTGCT GCTCTTGTTC CCAAGGCTGA ACTGGATGGA
GAAATGGGAG ATAGTCATGT TGGTTTACAG GCCCGGTTAA TGTCCCAGGC CATGAGGAAA
TTATCGGGTG CTATCAGTAA ATCAAAGACT GTCTGCATTT TTATTAACCA GATCAGAGAA
AAGGTCGGGG TAATGTTTGG TAATCCCGAA ACAACTCCAG GTGGACGAGC CCTTAAATTT
TATTCTTCAG TAAGAATGGA AATCAGAAAA ACTCAGACCC TGAAAAATGG AGATGAAATA
GTAGGGAGTC AGACCAGGGT GAAAGTTGTT AAAAACAAAG TTGCTCCTCC ATTCAGGCGG
GCTATTTTTG ATATTATGTA TGGAACGGGT ATATCGACAT CAGGATGTAT CCTCGATATG
GGGGTTGATA CCGGAATTAT TGACAGGGCT GGTTCCTGGT ATTCCTATGG TGATGAGCGT
CTGGGACAGG GACGTGAAAA TGCTAAAAAC TTCCTTGAAG ATAACCCGGA TATTATGAAA
GAAATTGAAA TGAAGATTAA AGAACGGGTA GGTCTGGAAG TGGAGGATGA AGTTGCCTCA
ACTAAAGAAA ATAAATCAAC TGGAAAATCG AAAGCTAAAG GTAAGAAAAA GTGA
 
Protein sequence
MVILAKNEKE KALEMAVKRI EKQFGQGSIM KLGEATALNV EVIPTGALPL DLALGVGGVP 
RGRIIEIYGP ESSGKTTLAL HIIAEAQKRN GVAAFIDAEH ALDPKYSENL GVNIDNLLIS
QPNNGEEALE IAEALVRSNA IDVIVIDSVA ALVPKAELDG EMGDSHVGLQ ARLMSQAMRK
LSGAISKSKT VCIFINQIRE KVGVMFGNPE TTPGGRALKF YSSVRMEIRK TQTLKNGDEI
VGSQTRVKVV KNKVAPPFRR AIFDIMYGTG ISTSGCILDM GVDTGIIDRA GSWYSYGDER
LGQGRENAKN FLEDNPDIMK EIEMKIKERV GLEVEDEVAS TKENKSTGKS KAKGKKK