Gene Hore_11840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_11840 
Symbol 
ID7313882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1279522 
End bp1280052 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content31% 
IMG OID643611620 
Productnucleoside recognition domain protein 
Protein accessionYP_002508929 
Protein GI220932021 
COG category[S] Function unknown 
COG ID[COG0700] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.456869 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTAT TTTTCGTAGT ATCCATCTGG GCTATTCCCC TTTTTTTTGT TATTATTCTT 
ATATATGGTT ACTTTAAAGG TATTAATTTA TATGAAACAT TTATTGAAGG TGCGGCTGAA
GGTTTTAATA CAGTTGTAAA AATAACCCCA TATTTACTGG CAATGATGGT AGCTATTAAT
ATTTTTAAGG AATCAGGAGC CCTGAAAATA TTTATTAATA TTTTAAAACC TTTTTTTAGC
TATCTTCAAA TACCAGAACC GGTGATTCCA TTATTATTTT TAAGACCACT GTCAGGCAGC
GCTTCTCTAT CTTATGCCAG TCAAATAATG AAACAGTTTG GCCCTGATTC ATTTATAGGG
AATCTTGCTT CTACAGTTCA GGGAAGTACA GAAACTACAT TTTATATCCT GGCAGTTTAC
TTCGGGGCTA TTGGAATAAA ACACTACAGG TATTCAATTA TCGTAGGATT GATTGCTGAT
GTTGCTGGAT TTTTTGCTGC TATATTTATA TGTAAACATA TATTTTTATA A
 
Protein sequence
MELFFVVSIW AIPLFFVIIL IYGYFKGINL YETFIEGAAE GFNTVVKITP YLLAMMVAIN 
IFKESGALKI FINILKPFFS YLQIPEPVIP LLFLRPLSGS ASLSYASQIM KQFGPDSFIG
NLASTVQGST ETTFYILAVY FGAIGIKHYR YSIIVGLIAD VAGFFAAIFI CKHIFL