Gene Hore_11800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_11800 
Symbol 
ID7313878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1277189 
End bp1277590 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content34% 
IMG OID643611616 
ProductBiopolymer transport protein ExbD/TolR 
Protein accessionYP_002508925 
Protein GI220932017 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAAAA CTTCTCTTAA GAAAAAACCA TCTATTAATA TAATTCCAAT GATTGATGTT 
ATCTTCTTTT TACTCGTCTT TTTTATGTTG TTTACAACCT TTCGCACAAC CCCTTACGGT
ATCGATCTTC AGTTACCAAA AGCGGTAACT GTTACCGGCC AACAGGAAAA TAATATGATT
GTCAATATAA ATGAAAAGGG CGAATTATAT TACCGTGGAG ATAAGGTAAC TATGTCCAGG
TTAAAAAATA TCGCTAAAAA AAGAACTAAC CAAACAGATA ATCTAGTTGT TATTATTAAT
GCCGATAAGG ATACCAAATA CCGTTACATA GTACAGGTTA TGGATAATTT ACGCCAGGTA
GGAATTTATA AGCTGGCACT TGCTGCCGAA AAAGAGGGGT AA
 
Protein sequence
MLKTSLKKKP SINIIPMIDV IFFLLVFFML FTTFRTTPYG IDLQLPKAVT VTGQQENNMI 
VNINEKGELY YRGDKVTMSR LKNIAKKRTN QTDNLVVIIN ADKDTKYRYI VQVMDNLRQV
GIYKLALAAE KEG