Gene Hore_11650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_11650 
Symbol 
ID7313863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand- 
Start bp1255438 
End bp1256424 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content36% 
IMG OID643611601 
ProducttRNA delta(2)-isopentenylpyrophosphate transferase 
Protein accessionYP_002508910 
Protein GI220932002 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase 
TIGRFAM ID[TIGR00174] tRNA isopentenyltransferase (miaA) 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTAAAC CCCTGACAAA TCATGGAAAT AAGAATATAT ATCCTGATAA TTCTACCCTT 
ATCGTTATCC TGGGACCTAC AGCTGTAGGA AAAACCAGTT TATCTTTGCA GCTTGCCCGG 
GATATAAATG GAGAGATTAT ATCAGCCGAT TCCATGCAGA TATATAAAGA CATGGATATA 
GGTACTGCCA AGGCCAGTCA AAAAGAGCGG AATATAATTC CCCATTATAT GATTGATATT 
ATTAAACCAG ATCAGGAGTT TTCAGTAGCT GAATACCAGG CCATGGTTGA TAACTTAATA 
CCCGGGATTG TATATCGAAA TAAAGTCCCC ATATTGGTGG GGGGAACAGG TTTATATATA 
AGGGCTGTTA TAGAGGGATT TTTATTCCCT GAAATGGACA AAAATATAGA ATTAAGGCAA 
AAACTTCAAA AAGAGGCGCA ACAGTATGGA AATAAATATG TTTATAACAA ACTTAAAAAA 
ATAGATCCTG AACTTGCTAA AAAACTCCAT CCAAATGATT TGAGGAGAGT AATACGGGGA 
ATAGAAGTGT ATCACCAGAC CGGAAAAACC ATGACTTATT TTAAAAAAGA GAAACAAAAA 
AAAGGTGATC GTTACCGAAA TCTGAAAATA GGGCTTTACC GGGAGCGTGA AGAACTTTAT 
AAACGAATTA ATAAAAGGGT CGATATTATG ATAGAACAGG GTCTCATTGA TGAAGTTAAG 
TACCTTTTAA CAAAATACCC TGATTTAAGT AAAACAGCCA GACAGGGTCT CGGTTATAAA 
GAAATTATCG GGTATTTAAA AAGAGAGTAT GACAGGGAAG AGGCCATCAG GCTTTTAAAA 
AGAAACACAA GACGGTATGC AAAACGGCAA TTGACCTGGT TCAGGCGGGA TCAGGATATA 
AACTGGTTTA ACCTTTCAAC CGGTGATTAT AAGAAAATTT ATTCAGAAAT AAAAAAACTG 
AGCAGGGACT TTTTACTTGA CTTTTAA
 
Protein sequence
MIKPLTNHGN KNIYPDNSTL IVILGPTAVG KTSLSLQLAR DINGEIISAD SMQIYKDMDI 
GTAKASQKER NIIPHYMIDI IKPDQEFSVA EYQAMVDNLI PGIVYRNKVP ILVGGTGLYI 
RAVIEGFLFP EMDKNIELRQ KLQKEAQQYG NKYVYNKLKK IDPELAKKLH PNDLRRVIRG 
IEVYHQTGKT MTYFKKEKQK KGDRYRNLKI GLYREREELY KRINKRVDIM IEQGLIDEVK 
YLLTKYPDLS KTARQGLGYK EIIGYLKREY DREEAIRLLK RNTRRYAKRQ LTWFRRDQDI 
NWFNLSTGDY KKIYSEIKKL SRDFLLDF