Gene Hore_11510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_11510 
Symbol 
ID7312896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand- 
Start bp1242254 
End bp1243264 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content37% 
IMG OID643611589 
ProductABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component 
Protein accessionYP_002508898 
Protein GI220931990 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.000000048144 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAGAA AAAAATTATT AATCAAGGTG TTATTATGGG TAAGTGTGGT TGTTTTCTTT 
TGTACCCAGG TATCTATGGC TGAAACTCAA ATGCCGGTTG TTAGACTAAC TGAAGTGGTA 
CATTCTATCT TTTATACACC ACAGTATATT GCCTTGAGCA ATAATTATTT TGAAGAGGAA 
GGAATCAAAG TAGAACTATC TACAGCCTGG GGTGGTGATA AAGCTGCTGC CTCATTGATG 
GCAGGAGCTA CCGATATTGC CCTTATTGGA CCAGAACCTA CTATTTATGT TTACCAGAGG 
GGTGCCGAAA ATTATATTGT TAATTTTGCC CAGCTAACCA ATACCGCCGG TTCCTTCCTG 
CTGGCCCGTG AGCCGATGCC AGATTTTAAA TGGGAAGATG TTAAAGGAAA GACTATAATC 
GGTAATCGAC CCGGCGGAGC ACCACAGATG GTTTTAGAAT ATGTACTTAA AACCAGGAAT 
ATTATTCCCG GCAAAGATGT TGAAGTTATC ACTAATCTTG ATTTTAAGGC CAATGCCGGA 
GCCTTTATTG GTGGTTTAGG AGATTTTGTC CAGCTCTTTG AACCAAATGC ATCATTGCTT 
GAATTAAAAA AACAGGGCTA TATTGTAGCT TCATTAGGAA CATCCGGTGG TGAATTGCCA 
TATACTGTTT ATATGGCCAG GGTTAATTAT ATTAAAAAGA ACCCTGACAT AATTCAAGCA 
TTTACTAATG CCATATACCG GGCTCAACAG TGGGTTCATA GCCATAATGT AGAAGAAATT 
GTTACAAAGA TAAAACCCTA TTTTCCGGAT ACCGATGAAG ATATTCTGTT AAGTGTTGTT 
AAACGTTACA AAGAACAGGG AACCTGGGAT ACAAATCCTG TAATTGAAAA AGAAATTTTT 
GAAAAATATG AAGAGATTAT TATCATGGCT GGTGAACTTG AAGAAAAAGC TCCATTTGAT 
GTTCTTGTTA ATAATAAGTT TGCTCATAAC GCCATTGAAA ACATACAGTA G
 
Protein sequence
MFRKKLLIKV LLWVSVVVFF CTQVSMAETQ MPVVRLTEVV HSIFYTPQYI ALSNNYFEEE 
GIKVELSTAW GGDKAAASLM AGATDIALIG PEPTIYVYQR GAENYIVNFA QLTNTAGSFL 
LAREPMPDFK WEDVKGKTII GNRPGGAPQM VLEYVLKTRN IIPGKDVEVI TNLDFKANAG 
AFIGGLGDFV QLFEPNASLL ELKKQGYIVA SLGTSGGELP YTVYMARVNY IKKNPDIIQA 
FTNAIYRAQQ WVHSHNVEEI VTKIKPYFPD TDEDILLSVV KRYKEQGTWD TNPVIEKEIF 
EKYEEIIIMA GELEEKAPFD VLVNNKFAHN AIENIQ