Gene Hore_11480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_11480 
Symbol 
ID7312893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand- 
Start bp1239866 
End bp1240498 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content38% 
IMG OID643611586 
ProductUracil-DNA glycosylase 
Protein accessionYP_002508895 
Protein GI220931987 
COG category[L] Replication, recombination and repair 
COG ID[COG1573] Uracil-DNA glycosylase 
TIGRFAM ID[TIGR00758] uracil-DNA glycosylase, family 4 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0000000000353711 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATATTTG ATAGAGATGG TAAGATACAA TCCAGTAGTT TAATAACTTA TCCTGATAAT 
GATTATAGTC TACTTAAAGA AAAAGCTCTG AAGTGTGACA GGTGCCAGTT AAGGCAGGGA 
TGTACCCAGG TGGTTATGGG CTATGGTCCC ATTGATAGAA AAATAATGTT TGTTGGTGAG 
GGACCTGGAG CTGATGAAGA CAGGCTGGGG AAACCTTTTG TCGGTAAAGC AGGTAAGCTG 
CTGACTAAAA TATTAAATTC AGTGGGGCTT GAAAGGGAAG ATGTTTACAT CACAAATATT 
GTTAAGTGTC GCCCTCCCAA TAACAGACAA CCCACCCGTT CTGAAGCAGA AGCCTGTTCA 
CCTATATTAA AGGCAGAAAT TAAATTAATA GATCCCCTGG TCATTGTACC TCTGGGGTCT 
GTAGCTTTAA AGAATTTAGT TGATGAAAAA GCATCGATAA TGAGAACAAG AGGCAAATGG 
AAGAAGATAG GGAAATATTA TTTTTTTCCG ACCTTTCATC CAGCTTTTCT TTTGAGAAAT 
CCCAAAATGA AAAAATTGGT CTGGAGAGAT TTTAAGGTTA TCAGGAAGGC AGTAGACCGT 
ATAAAAGAAC TTAAGAAAAC TGGTGAATTA TAA
 
Protein sequence
MIFDRDGKIQ SSSLITYPDN DYSLLKEKAL KCDRCQLRQG CTQVVMGYGP IDRKIMFVGE 
GPGADEDRLG KPFVGKAGKL LTKILNSVGL EREDVYITNI VKCRPPNNRQ PTRSEAEACS 
PILKAEIKLI DPLVIVPLGS VALKNLVDEK ASIMRTRGKW KKIGKYYFFP TFHPAFLLRN 
PKMKKLVWRD FKVIRKAVDR IKELKKTGEL