| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_11240 |
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| Symbol | |
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| ID | 7312869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | + |
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| Start bp | 1218363 |
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| End bp | 1219106 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 643611562 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_002508871 |
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| Protein GI | 220931963 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 0.617467 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTTG TTTTTGAAGT AATTATTAAT GGATTAGTTA TTTTATATTT ATATAGGCCT
GTTGTTAAAA AATATTTTGG TATAAGTCAG AAATACCGTA TTATAAGGAT TGTAGTAAGT
ATCTGTCTTA TTTCAATTCC TTTATTTATC TCAGTTTTAC CATCATTGAT TGATCAGTTT
ACATATTTTT ATTATATGGG CCAGTTGGGT GAAATCAGTG AAATTTATTT ACAGGGAGAT
CTGGATAGGG CCCTGACAGA AGCAAATAAG TTTGTAAAAA AATACCCGGA AAATGACCTG
GCCTGGACTA TAAGAGGAAA TATACTTTTA GATAAAGGCA TGGTTAATGA AGCTGAAAAA
AGCTTCAAAA AGGCCCTTAT AATTAATCCC GAAAACTTCA GGGCAAAAAG CACTTTAGGA
CTGGTTTATA AAATGAGAGG AGACCTTGAC AAAGCCCTTA GCCAGTACAA AAAAGCCATT
GAAATCAAAC CAAATTATGG TCAGGCCTAT ACCAATATTG CTGTTGTTAA ACTTATGCAG
GGTCTTTATG AAGAGTCTTT ACATTATGCA AAACTAGGTT ATAAATATGA TAAAAGTGAC
CCTGTTATTG TAGCTAACCT GTCATTTTGC TATCATGCTG TGGGGGACTA TAAAAACCGG
GATAGATATT TAAAAATGGC AGAAGAGATG GGGTATAAAA ATGTTGAGGT CTTAAAAAGT
GTTTATACTG AAGAAAGTAA TTAA
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| Protein sequence | MKFVFEVIIN GLVILYLYRP VVKKYFGISQ KYRIIRIVVS ICLISIPLFI SVLPSLIDQF
TYFYYMGQLG EISEIYLQGD LDRALTEANK FVKKYPENDL AWTIRGNILL DKGMVNEAEK
SFKKALIINP ENFRAKSTLG LVYKMRGDLD KALSQYKKAI EIKPNYGQAY TNIAVVKLMQ
GLYEESLHYA KLGYKYDKSD PVIVANLSFC YHAVGDYKNR DRYLKMAEEM GYKNVEVLKS
VYTEESN
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