Gene Hore_11000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_11000 
Symbol 
ID7312842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1194367 
End bp1195125 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content39% 
IMG OID643611537 
Productbeta-lactamase domain protein 
Protein accessionYP_002508849 
Protein GI220931941 
COG category[R] General function prediction only 
COG ID[COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.00714887 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGATAG TATTTCTGGG AACAGGAACC TCTCATGGAG TTCCGGTCAT TGGGTGTAAC 
TGTAAAACCT GCCAGTCCAA AAATCCAAGG AACAAACGGA CCCGTTCCTC TATTTATGTT
AAATTTGAAT CTTTTTCTAT TCTGGTAGAT ACTCCCCCCG AACTCCGTTT ACAGCTTCTC
AATAACGGAA TACATAAAGT AGATGCTATT CTATATACCC ATTCCCACGC CGATCATATT
ATGGGCTTTG ATGATATCAG GGCCTTTAAT TTAATTAATA AAAGACCGCT GCCCTGTTAT
GGTAACAGTT CTACAATTAA AGATATCAAG AGAACCTTTA ATTATATTTT TAACGCTGTA
CAGATGGGTG GAGGGTTACC TCAGGTTCAA CTCATTGAGG TTAATTCTAC TTTTTTTATT
GAGGACATAA AAATCATCCC CCTTCCTGTC AAACATGGAA AACTTGATAT CCTGGGTTAC
CGCTTTGGGC GAATAGCCTA TATAACTGAT TGTAGCCACA TTCCTGAATC AACCTATGAT
AAGTTAGAGG GGCTGGATAT ACTGATAATA GATGCGTTAA GATACCGGCC TCACCCTACT
CACATGAATA TATCAGAAGC CCTGGAAGTT ATTGAGAAAA CAGGGGTTAG CAGGGCTTAT
TTAACTCACC TTTCCCATAG TGTTGAACAT GAGGAGCTAA AAAAGAATTT ACCTTCATGG
GTTAGACCTG CCTATGATGG TTTAAAGATA ATAATATAG
 
Protein sequence
MEIVFLGTGT SHGVPVIGCN CKTCQSKNPR NKRTRSSIYV KFESFSILVD TPPELRLQLL 
NNGIHKVDAI LYTHSHADHI MGFDDIRAFN LINKRPLPCY GNSSTIKDIK RTFNYIFNAV
QMGGGLPQVQ LIEVNSTFFI EDIKIIPLPV KHGKLDILGY RFGRIAYITD CSHIPESTYD
KLEGLDILII DALRYRPHPT HMNISEALEV IEKTGVSRAY LTHLSHSVEH EELKKNLPSW
VRPAYDGLKI II