Gene Hore_10950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_10950 
Symbol 
ID7312837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1189965 
End bp1192091 
Gene Length2127 bp 
Protein Length708 aa 
Translation table11 
GC content35% 
IMG OID643611532 
ProductSpoIID/LytB domain protein 
Protein accessionYP_002508844 
Protein GI220931936 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG2385] Sporulation protein and related proteins 
TIGRFAM ID[TIGR02669] SpoIID/LytB domain 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0118961 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACCATT TTAGTTATAA AAATACCTTA ATTATATTAG TTGCCATGAT AACATTTGTT 
ACAATGCTGA TCAGTATTGA CGGAGAAAGG GTTAGTGGTC TAACAAAGTT GCTTGAGACT
GATTTAACTG ATTTTGAAAT ACATAATTTA TATAAAAAAG CCAGAACAGA ATATTATAAC
GGTAATCCCC TTAAAGCATA TGATTTATAT AAAACTATTC ATGGGGCCCG GAGTAAAGAC
CTTAGGAGCC TTAAAAACCT TGTTACGCTT TCAGAAGAGC TGGGTCAATA CGAAGATACC
CTCTTTTACT TGAACAGGTT AATCAACCTT GAACCGGAGA ACATTTACTG GAAATATAAA
AAAGGACAGG TTTTTTACCA GTCTGCCAGA TATGAAAGTG CTTATAAATT ACTTTATGAT
ACCTATCAAT TACTTAACCA GAATAATAAT AAAAATGGAC AAATCCTCTC AAATAAAGAG
AAATCACTGC TAAACTACTA TCTGGGGAAG ATACATCAGT TAAAAGGTGA AACAGATAAA
GCTAAAAAGC ATTTCCAGAA TGGGATTAAA TTATATTCTG ATTTACCCTT GAATTATATG
GGCCTTGCCG GGGTTTTTAA AAATGAAAGA CAATATAAAA AAGCAGTATA TCATTATAAA
TTATCCCTGA GCAGGGATTA CAGTCTTTCT TTTATATATC CAGAACTGGC AATCTTAATG
GAGAAACTGA ATAATTACGA AGATGCCTAT TATTACTGGA AGAAAAGTCT GGCAACCGGT
AATAGTACCA ACAGGGCCAG AAAAAAGATA ACTTTTTACG AAGAAAACTA CCCAGCTATC
ATCAAAAAAG AGGAATCTGA AAAAGAAAAA AAAAGGGAGA ATATATACTG GCGCCGTGTA
GAACCGGTTT ATGGAGAGAA TATACCTGAA TTAAGGATAG GACTGGTTGA AGGCGTTAAG
TCAATTTCCT TTCAGGCTTC ATCTGATTTT GCCTTTGTTC TTAAAGGAAA TAATAAGCCT
TTACTACAGG GTAATGCCAA TACAGAGTGG AGTGTAAAAA GGGAAGAGGG GACATATTTT
ATTTTCAAAG AAAAGAAACT TATAAGGAAG TATAAATCAA ATAAACCTTT AGTTATAAAA
TCAAATAAAC ATGGATTATT TTTATTATAT GACCTTGCCT ATGGTAAAGG TTATTTCTGG
GCAGACAATG AAGACCGTCA GTTCCGCGGT GCCCTGGAAG CCTATCCGGT CAATGATGGT
TTCAACCTTA TAAATATTGT TAATGTGGAA GCATATCTTT TATCAGTTGT ACCATCTGAG
ATGCCGGCCT GGTGGCCACA TGAGGCTTTG AAAACACAGG CCGTTGCTGC CAGGAGTTAT
GCCCTGGCCC ATTTGAACAG ACATAAGGAT GACGGATATA ATTTATGTGC TGAAGTACAT
TGTGCTGCTT ACAGGGGGGT TGAGAAAGAA AGCCCACGGA CAACAAAAGC TATTCTGGAA
ACAATGGGTG AGGTTATTAC CTACCATAAT AGAATTATTG ATGCAGTTTT CAGTAGTAAT
AGTGGTGGGT TTTCCGAGAG TAGTTATGAT ATCTGGGGTA GTAAACTACC TTATTTACCG
GGGTCCAATA ATATGATTGA TAATAATATT GAATTCCCTC TTGACCCCTA TAAACTTGAA
AGATGGTTAA TCACAGACAC ACCTTCTTAT TCAAATAACC CCCGTTATTC ACCTAACAAT
AGTTATCGTT GGGTAAAATA TTTACCGATA GGAGTCCTTG AAGAGAAGTT AAATATAAAA
GATATAATAA ATATAATCCC CCTTGAAAAA AGCAAAGGGG GAAGTGTCTT GAAACTAAAG
ATTACTGGTA GGAATAAAAG CCTGACCTTA TCGGGGGGAA GGATTAGAAG TTATCTCGGG
GGATTGAGGA GTAGTAGATT TTTAATAAAA AAAATATATA GTCCTGAGGG GACCATATCT
TCATTAATAC TATATGGAGG TGGTTGGGGG CATAATGTTG GCCTCGATCA AACGGCAGCT
GCCAGTATGG CTGATGAAGG TTTTAATTAT AAACAGATTT TAAAACATTT TTATAAAGAG
ACCGAGATAA AAAAATTATA TGAGTAA
 
Protein sequence
MYHFSYKNTL IILVAMITFV TMLISIDGER VSGLTKLLET DLTDFEIHNL YKKARTEYYN 
GNPLKAYDLY KTIHGARSKD LRSLKNLVTL SEELGQYEDT LFYLNRLINL EPENIYWKYK
KGQVFYQSAR YESAYKLLYD TYQLLNQNNN KNGQILSNKE KSLLNYYLGK IHQLKGETDK
AKKHFQNGIK LYSDLPLNYM GLAGVFKNER QYKKAVYHYK LSLSRDYSLS FIYPELAILM
EKLNNYEDAY YYWKKSLATG NSTNRARKKI TFYEENYPAI IKKEESEKEK KRENIYWRRV
EPVYGENIPE LRIGLVEGVK SISFQASSDF AFVLKGNNKP LLQGNANTEW SVKREEGTYF
IFKEKKLIRK YKSNKPLVIK SNKHGLFLLY DLAYGKGYFW ADNEDRQFRG ALEAYPVNDG
FNLINIVNVE AYLLSVVPSE MPAWWPHEAL KTQAVAARSY ALAHLNRHKD DGYNLCAEVH
CAAYRGVEKE SPRTTKAILE TMGEVITYHN RIIDAVFSSN SGGFSESSYD IWGSKLPYLP
GSNNMIDNNI EFPLDPYKLE RWLITDTPSY SNNPRYSPNN SYRWVKYLPI GVLEEKLNIK
DIINIIPLEK SKGGSVLKLK ITGRNKSLTL SGGRIRSYLG GLRSSRFLIK KIYSPEGTIS
SLILYGGGWG HNVGLDQTAA ASMADEGFNY KQILKHFYKE TEIKKLYE