Gene Hore_10920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_10920 
Symbol 
ID7312834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1187292 
End bp1187714 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content35% 
IMG OID643611529 
Productpredicted DNA-binding protein with PD1-like DNA-binding motif 
Protein accessionYP_002508841 
Protein GI220931933 
COG category[R] General function prediction only 
COG ID[COG1661] Predicted DNA-binding protein with PD1-like DNA-binding motif 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTGAAT ATACTAAGGG ACGAACTTTC CTCGGAAGAT TACCGAAAGG TGGTGACCTT 
TTACAGGAAT TAACGAAAGT TGTTAGGGAA AATAATATTG AAACAGGTGT TTTTATGTTA
ATCGGAGCAG TGGAAAAAGC AAAATTCGGT TATTATTTAC AGGATGAGAG GGAGTTTTTT
TTTAAAGAAA TAGATGAACA CCTTGAGATA GTTAGCTGTA AGGGAAATAT TTCATTATTG
AATGGAGAAC CCTTTGTTCA TGCCCATATT ATTGTATCAG ACGAAAATGG AAATACCTAT
GGGGGGCATC TGTCAGAGGA AACAACTATT TTTGCAGCTG AATATTTTAT TCAGGAATTA
ATAGGAGAAA AACTTGAGAG AACTTTTGAT AAGAAAACAG GTCTCTCATT GTGGTCAATG
TAA
 
Protein sequence
MGEYTKGRTF LGRLPKGGDL LQELTKVVRE NNIETGVFML IGAVEKAKFG YYLQDEREFF 
FKEIDEHLEI VSCKGNISLL NGEPFVHAHI IVSDENGNTY GGHLSEETTI FAAEYFIQEL
IGEKLERTFD KKTGLSLWSM