| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_10890 |
|---|
| Symbol | |
|---|
| ID | 7312831 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | + |
|---|
| Start bp | 1183071 |
|---|
| End bp | 1184147 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 643611526 |
|---|
| Product | 3-isopropylmalate dehydrogenase |
|---|
| Protein accession | YP_002508838 |
|---|
| Protein GI | 220931930 |
|---|
| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 53 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTAAAA TTGCTGTAAT ACCCGGGGAT GGAATTGGAA AAGAGGTTAC CGATCAGGGT
CTTAAGGTTA TGGAATATTT AAATGGTAAA AATGGATTAC AGTTAACCCT TGATAAATTC
GAACTGGGTG CTGAAAGGTA TCTAAAAAAT GGAGAAGTTT TGCCTGAAAA AGTTTTGAAA
AAACTTGAAA CATATAATTC TATATATCTG GGGGCAGTGG GGGATCCACG GGTTCCAGCC
GGTGTCCTGG AACAGGGTAT ATTGTTGAAA CTTAGATTTT ATTTTGACCA GTATGTTAAT
CTAAGACCGG TTAAACTTTT TAAAGATGAC TTTTCACCGT TAAAAAACAA AGGGGTTAAT
GACATTGATT TTACAGTGAT CAGGGAAAAC ACTGAAGGGT TATATGCCGG GGTAGGTGGA
TTTTTAAAGA AGAATACCCC TGATGAAGTA GCCATCCAGG AGATGGTTAA TACCCGGAAG
GGTGTTGACA GGGTTATAAA ATATGCTTTT GAATATGCCC TCAAATATGG AAAAGAACCC
AAGGTTACCC TGTGTGATAA GAGCAATGTA TTAACCTATG CCCATAATCT CTGGCAGAGG
GCCTTTAAGG ATATTGCTGT AACTTATCCC CGGGTTGAAA CTGACCATTT TCTGGTTGAT
GCCATTACCA TGAAGATGGT AAGAAATCCT GAAATATTTG ATGTTATTGT TACCTGTAAT
ATGTTCGGTG ATATTATTAC AGACCTGGGG GCTGAACTTC AGGGTGGTAT GGGCCTGGCC
GTTTCCGGAA ACATTAACCC AGACAGTGTT TCCATGTTTG AACCCGTTCA TGGTTCTGCT
CCGGATATTG CCGGTCAAAA TAAAGCAAAT CCACTGGCTG CTATTCTGGC GGTTGGGATG
ATGTTGAAAC ATCTCGGTTA TTCTAATCTG GGCGACCGGG TAGAAAAGGC TGTGGAACAG
GCCCTGAAGG AAAATCAGGT AACCCCGGAT ATGGGAGGAA ATTTATCGAC TGATGAAGTT
GGTAATTATA TTGTAACTTT ATTAAAACAG GACAGGGAAG GTGAGGATGA TGAGTAG
|
|---|
| Protein sequence | MLKIAVIPGD GIGKEVTDQG LKVMEYLNGK NGLQLTLDKF ELGAERYLKN GEVLPEKVLK
KLETYNSIYL GAVGDPRVPA GVLEQGILLK LRFYFDQYVN LRPVKLFKDD FSPLKNKGVN
DIDFTVIREN TEGLYAGVGG FLKKNTPDEV AIQEMVNTRK GVDRVIKYAF EYALKYGKEP
KVTLCDKSNV LTYAHNLWQR AFKDIAVTYP RVETDHFLVD AITMKMVRNP EIFDVIVTCN
MFGDIITDLG AELQGGMGLA VSGNINPDSV SMFEPVHGSA PDIAGQNKAN PLAAILAVGM
MLKHLGYSNL GDRVEKAVEQ ALKENQVTPD MGGNLSTDEV GNYIVTLLKQ DREGEDDE
|
|---|
| |