Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_10880 |
Symbol | |
ID | 7312830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | + |
Start bp | 1182581 |
End bp | 1183078 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643611525 |
Product | 3-isopropylmalate dehydratase, small subunit |
Protein accession | YP_002508837 |
Protein GI | 220931929 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
TIGRFAM ID | [TIGR02084] 3-isopropylmalate dehydratase, small subunit [TIGR02087] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTTA AGGGAAGAGT ACTTAAATAT GGTGATAATG TTGATACTGA TGTAATTATT CCGGCACGTT ACCTGAATAC ATCAAACCCG GATGAGCTTG CCCGTCATTG CATGGAGGAT ATAGACCCTG ATTTTGCCAG TAAAGTAAAG GATGGAGATA TTATAGTTGC TGGAAAAAAT TTCGGTTCAG GTAGTTCCAG GGAACATGCC CCCCTCGCTA TAAAATCGGC TGGGGTCTCC TGTGTTATTG CGGAGAGTTT TGCCAGGATT TTTTATCGAA ATGCAATCAA CATTGGTTTA CCTATTTTAG AATGCAAGGA TGTTACTGAC AGGATAGAAG AGGGGGACTT AGTAGAAGTT GATTTAAATG AAGGTAAAAT TAAGTTACCA GAAAAAAATA TAAATATTGA TTCAACACCC TTTCCCTCTT TTATGCAGGA AATTATTAAA GCAGGTGGGT TAATTGAAAA AATTAAAGGG GGAATAAAAC ATGCTTAA
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Protein sequence | MKLKGRVLKY GDNVDTDVII PARYLNTSNP DELARHCMED IDPDFASKVK DGDIIVAGKN FGSGSSREHA PLAIKSAGVS CVIAESFARI FYRNAINIGL PILECKDVTD RIEEGDLVEV DLNEGKIKLP EKNINIDSTP FPSFMQEIIK AGGLIEKIKG GIKHA
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