Gene Hore_10880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_10880 
Symbol 
ID7312830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1182581 
End bp1183078 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content37% 
IMG OID643611525 
Product3-isopropylmalate dehydratase, small subunit 
Protein accessionYP_002508837 
Protein GI220931929 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0066] 3-isopropylmalate dehydratase small subunit 
TIGRFAM ID[TIGR02084] 3-isopropylmalate dehydratase, small subunit
[TIGR02087] 3-isopropylmalate dehydratase, small subunit 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTTA AGGGAAGAGT ACTTAAATAT GGTGATAATG TTGATACTGA TGTAATTATT 
CCGGCACGTT ACCTGAATAC ATCAAACCCG GATGAGCTTG CCCGTCATTG CATGGAGGAT
ATAGACCCTG ATTTTGCCAG TAAAGTAAAG GATGGAGATA TTATAGTTGC TGGAAAAAAT
TTCGGTTCAG GTAGTTCCAG GGAACATGCC CCCCTCGCTA TAAAATCGGC TGGGGTCTCC
TGTGTTATTG CGGAGAGTTT TGCCAGGATT TTTTATCGAA ATGCAATCAA CATTGGTTTA
CCTATTTTAG AATGCAAGGA TGTTACTGAC AGGATAGAAG AGGGGGACTT AGTAGAAGTT
GATTTAAATG AAGGTAAAAT TAAGTTACCA GAAAAAAATA TAAATATTGA TTCAACACCC
TTTCCCTCTT TTATGCAGGA AATTATTAAA GCAGGTGGGT TAATTGAAAA AATTAAAGGG
GGAATAAAAC ATGCTTAA
 
Protein sequence
MKLKGRVLKY GDNVDTDVII PARYLNTSNP DELARHCMED IDPDFASKVK DGDIIVAGKN 
FGSGSSREHA PLAIKSAGVS CVIAESFARI FYRNAINIGL PILECKDVTD RIEEGDLVEV
DLNEGKIKLP EKNINIDSTP FPSFMQEIIK AGGLIEKIKG GIKHA