Gene Hore_10290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_10290 
Symbol 
ID7314617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1118651 
End bp1119403 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content37% 
IMG OID643611468 
Product3-oxoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_002508780 
Protein GI220931872 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.00209821 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTAA AGGGTAAAGT TGCAGTAATT ACAGGAAGCT CAAGGGGCAT AGGAGCGGCA 
ACTGCCAAAA AGTTAGCCGA GAAAGGGGCC AATGTTGTTA TTAATTATCC TTTTCCCGGT
GAAAAGGAGA ATACTAATAA AGTTGTTGCA GAAATTGAAA ACATAACTGG TGTTGAAGCT
ATTGCAGTAG AAGCGGATGT TTCCAGCCTG GATGCTGCCA AAAAACTTAT AAAAAAAGCA
GTAGATAAAT TTGGTAAGGT AGATATTTTA GTAAATAATG CCGGTATAAC CCGTGATAAT
TTGCTGTTAA GAATGAAAGA AGAAGAGTGG GATTCAGTTA TTAATGTTAA TTTGAAGGGT
GTCTTTAACT GTACTAAGGC AGTTGTCAGG AGTATGATGA AACAACGTTC CGGTAAAATT
ATTAATCTGG CTTCTGTGGT TGGTATTATG GGAAATGCCG GTCAGTCCAA TTATTCTGCC
TCTAAAGCAG GTGTAATTGG CTTTACCAAA TCTATAGCCA AAGAATTATC CTCCAGGGGA
ATAACTGCAA ATGCTGTAGC TCCTGGTTTT ATCAAGTCAC ATATGACTGA CCAGTTATCA
GATGATGTGA AAGAAGCCAT GTTAAATGCT ATACCTCTGA AAAAATTCGG AACAGTAGAC
GATGTTGCCA GTTTAATATG TTTCCTTGCT TCACCAGAAG CTGATTATAT AAATGGTCAG
GTTATCAATG TTGATGGTGG TATGGTAATG TAA
 
Protein sequence
MNLKGKVAVI TGSSRGIGAA TAKKLAEKGA NVVINYPFPG EKENTNKVVA EIENITGVEA 
IAVEADVSSL DAAKKLIKKA VDKFGKVDIL VNNAGITRDN LLLRMKEEEW DSVINVNLKG
VFNCTKAVVR SMMKQRSGKI INLASVVGIM GNAGQSNYSA SKAGVIGFTK SIAKELSSRG
ITANAVAPGF IKSHMTDQLS DDVKEAMLNA IPLKKFGTVD DVASLICFLA SPEADYINGQ
VINVDGGMVM