| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_10240 |
|---|
| Symbol | |
|---|
| ID | 7314612 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | + |
|---|
| Start bp | 1114139 |
|---|
| End bp | 1114705 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 643611463 |
|---|
| Product | fatty acid biosynthesis transcriptional regulator |
|---|
| Protein accession | YP_002508775 |
|---|
| Protein GI | 220931867 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000000000167707 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAGGC TGTCAAAAAA AGAAAGACAA AAATTACTTA AACAAGTAAT TAAAGATAAC
CCTTTTTTAA CTGATAAAGA ACTGGCAGAT AAATTTGAAG TTAGTATTCA GACAATAAGA
CTTGACAGGT TGGAACTGGG GATTCCAGAG GTCCGGGAAC GGACTAAAAC AGTAGCACAA
AATGCCTACG CCCGATTACG GTCAGTAAAT GAAGGGGAAG TTATTGGTGA ATTGACTAAA
CTCAAACTTG ATAACTACGC CGAATCCTAT TTAACAACAA CCCGGGAGAT GGCATTACAG
AAAACACCTA TAATAAGAGG ACATCATATC TTTGCCCAGG CAAATTCCCT TGCTGTAGCT
GTAATAGATG CTGAAAAAGT GGTAACTGGT AGTGCTGAAA TTAAATTTAC CAGACCAGTT
ATGGTAGGTG ATGTAATAAA AGCCAGGGCT GAGGTTAAAG AGATTAAAGG TAAAAAGTAT
TTTGTAGAAA TAAAAATATA TAAAGATTCA GACCTGGTTT TTTATGGTGA TTTTACAATG
TTTAAACTTG AAAATGGAGG GGTATAA
|
|---|
| Protein sequence | MSRLSKKERQ KLLKQVIKDN PFLTDKELAD KFEVSIQTIR LDRLELGIPE VRERTKTVAQ
NAYARLRSVN EGEVIGELTK LKLDNYAESY LTTTREMALQ KTPIIRGHHI FAQANSLAVA
VIDAEKVVTG SAEIKFTRPV MVGDVIKARA EVKEIKGKKY FVEIKIYKDS DLVFYGDFTM
FKLENGGV
|
|---|
| |