Gene Hore_10010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_10010 
Symbol 
ID7314589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand+ 
Start bp1091911 
End bp1093125 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content41% 
IMG OID643611440 
Product3,4-dihydroxy-2-butanone 4-phosphate synthase 
Protein accessionYP_002508752 
Protein GI220931844 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00505] GTP cyclohydrolase II
[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACAA TTGAAGAAGC AATTGAAGAT ATTAAACAGG GGAAAATGGT TATAGTAGTT 
GATGATGAAG ACAGGGAAAA TGAAGGAGAT CTGGTTATGG CTGCCGAAAA AGTAACTCCT 
GAAAGTATTA ATTTTATGAT CAGGTTTGCC CGCGGGCTGG TCTGTGTTCC CATGGAAGAG 
GAAAGACTTA GAGAACTTGA TTTACCTATG ATGGTTGTTA ATAATACCGA CCCCCAAGAA 
ACAGGGTTTA CTCTTTCAGT AGACCACCGG GATACAACAA CTGGAATCTC AGCCAGGGAA 
CGGGCTTTGA CTGTTAAAGA ACTGGTTAGC GATAATAGTA AACATACAGA TTTCAGGCGA 
CCCGGTCATA TTTTCCCCCT CCGCGCCAGG CCAGGCGGGG TTTTAAGGAG GGCAGGACAT 
ACTGAAGCTG CAGTAGATCT GGCCAGGCTG GCTGGTCTGA AACCAGCCGG TGTTATTTGT 
GAGATTATAA AAGAAGATGG TACAATGGCC AGGTTACCTG ATCTGGAGGA GTTTTCTAAA 
AAGCATGGAC TTAAAATAGT TACAATTGAA GATTTAATAA AATATCGTAA GTCTAAAGAA 
AAACTTGTCA AAAAAGAGGC TGAAGCCCAA CTTCCAACCA GGTTTGGTGA TTTTAAAATA 
AAAGTTTATA AGTCTATCAT TGGTAACCAG GAACATATTG CCCTGGTAAA AGGTGAGGTA 
GCTGGCAAAA AGAATGTTCT GGTAAGAGTA CACTCAGAAT GTTTAACAGG TGATACCTTT 
GGCTCTTTAA GATGTGATTG TGGTCAACAG CTGGCCGCAG CTTTGAAAAT GATTGATAAA 
GAAGGCCATG GTGTTTTGCT ATACATGAGA CAGGAGGGAA GAGGGATTGG TCTTTTAAAC 
AAAATAAAGG CATATGCTTT ACAGGATAAG GGGATGGATA CTGTTGAAGC CAATCTGGCC 
CTTGGCTTTC CTCCTGATCT GAGGGATTAC GGGATAGGAG CCCAGATTCT GGCAGACCTG 
GGGTTAACCT CTATACGTCT TCTTACCAAT AACCCACGAA AGATTATCGG ACTGGAAGGG 
TATGGTCTTA TGGTTGTAGA CAGGGTTCCC ATTGAAATTG AACCCAATGA AACCAATAAA 
TATTACCTTG AGATAAAAAG GGATAAAATG GGTCATTTAT TAAATTTAGA AGAAAGGGGT 
AAAAATAATG GGTAA
 
Protein sequence
MNTIEEAIED IKQGKMVIVV DDEDRENEGD LVMAAEKVTP ESINFMIRFA RGLVCVPMEE 
ERLRELDLPM MVVNNTDPQE TGFTLSVDHR DTTTGISARE RALTVKELVS DNSKHTDFRR 
PGHIFPLRAR PGGVLRRAGH TEAAVDLARL AGLKPAGVIC EIIKEDGTMA RLPDLEEFSK 
KHGLKIVTIE DLIKYRKSKE KLVKKEAEAQ LPTRFGDFKI KVYKSIIGNQ EHIALVKGEV 
AGKKNVLVRV HSECLTGDTF GSLRCDCGQQ LAAALKMIDK EGHGVLLYMR QEGRGIGLLN 
KIKAYALQDK GMDTVEANLA LGFPPDLRDY GIGAQILADL GLTSIRLLTN NPRKIIGLEG 
YGLMVVDRVP IEIEPNETNK YYLEIKRDKM GHLLNLEERG KNNG