| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_09990 |
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| Symbol | |
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| ID | 7314587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | + |
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| Start bp | 1090117 |
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| End bp | 1091217 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643611438 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_002508750 |
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| Protein GI | 220931842 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATAAAG ATATTTATTA CATGGAAAAA GCATTGACCC TGGCCCGAAA GGGGGTCGGT
TATACCAGCC CTAATCCAAT GGTTGGGGCA GTGGTTGTCA GGGATGATAA AATCGTAGGA
GAGGGTCACC ACAGGTATTA CGGCGGGCCC CATGCTGAAG TATATGCCCT GGAGGAAGCA
GGGGAAAAGG CGTTTGGAAG TACCCTTTAT GTAAATTTAG AACCATGTAG TCATTATGGT
AAGACACCAC CCTGTGTCTT TAAAATTATT GAATCGGGTG TTAAAAGAGT AGTTATTTCT
ATGGTGGACC CTAATCCCAG GGTATCGGGC AAGGGTATAG AAATGTTAAA AAAAGCAGGC
ATTGAAGTAA CGGTCGGGGT TTTAGAGGAA AAGGCCCGTA ATTTAAATGA GGTTTTTATA
AAAAATATTA CAAACAGGAT GCCCTTTGTA TATTTGAAGA TGGCCCAGAC CCTTGATGGC
TATCTGGCTA CCTCTTCCGG AGATTCAAGA TGGGTTACTG GTAAAAAAGC CCGTCAATAT
GTACACAGAC TGAGACACCG GGTTGATGCT ATTCTGGTTG GTATTGGTAC AGTACTTAAA
GATGACCCCA GACTTACAAC CAGATTATCT GATGGTAAAG GTAAGGACAG TATAAAAATT
GTACTTGATA GTAAATTAAA AATACCTCTG ACAGCAAATA TTTTAAACCA GGAAAATGAT
GCCCCTGTCA TAATTGTCTG TGGTCACAGG GTAGATAGTC ATAAGAAAAA GTCCCTTAAG
CAACTTAAAA GTGTTGAGGT TTTAAGTCTT GATTTAAATG AGTATGGCCA GATCCCTATA
AAAGAATTAT TAATTAACTT AAACAAAAAA GGTATTTCCA GTTTACTGGT TGAAGGTGGT
GGAAGAGTAA ACTATTCTTT CCTGAAGGAA GGGTTTGTTG ATAAAATGTT ATTTTTCATT
GCTCCCAAAT TATTGGGGGG GAGTGACGGG GTTTCTGTTT TTGACGGAAA AGGGGCAGAA
GTTATGGCAA AAGTAAAGAA ATTAAAAAAA TATAAAATTG AGGAAATAGG AGAAGATATA
TTGATTACAG GTACTTTATA A
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| Protein sequence | MDKDIYYMEK ALTLARKGVG YTSPNPMVGA VVVRDDKIVG EGHHRYYGGP HAEVYALEEA
GEKAFGSTLY VNLEPCSHYG KTPPCVFKII ESGVKRVVIS MVDPNPRVSG KGIEMLKKAG
IEVTVGVLEE KARNLNEVFI KNITNRMPFV YLKMAQTLDG YLATSSGDSR WVTGKKARQY
VHRLRHRVDA ILVGIGTVLK DDPRLTTRLS DGKGKDSIKI VLDSKLKIPL TANILNQEND
APVIIVCGHR VDSHKKKSLK QLKSVEVLSL DLNEYGQIPI KELLINLNKK GISSLLVEGG
GRVNYSFLKE GFVDKMLFFI APKLLGGSDG VSVFDGKGAE VMAKVKKLKK YKIEEIGEDI
LITGTL
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