Gene Hore_09980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_09980 
Symbol 
ID7314586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand+ 
Start bp1089082 
End bp1089735 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content36% 
IMG OID643611437 
ProductRibulose-phosphate 3-epimerase 
Protein accessionYP_002508749 
Protein GI220931841 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0036] Pentose-5-phosphate-3-epimerase 
TIGRFAM ID[TIGR01163] ribulose-phosphate 3-epimerase 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAGAAT TTGCGCCATC TATTTTATCA GCAGATTTTA GTAATTTAAA AGAGGAAGTT 
GCCAGGGTAA AAGAGGCCAA TTATTTACAT CTTGATGTTA TGGATGGTAT GTTTGTTCCC 
AATATTACAA TTGGACCTGG TATAATAAAG AGTATTAGAA AACATACCGA TTTGAAGTTT 
GATACCCATC TGATGATTGA GGAGCCTGAG AGATATATAA AAGATTTTGC TGAAGCCGGT 
AGTGATATTA TTACTGTTCA CTGTGAAGCT ACTAAACATT TACACCGGCT TATATACCAG 
ATAAAGGACC AGGGATGTCT GGCTGGAGTT GCTTTAAATC CAGCAACATC ATTAACCAGA 
ATAGAACATG TGTTAAAGGA TCTGGATCTG GTTTTAATTA TGTCCGTAAA TCCCGGGTTT 
GGTGGTCAGA AACTGATTCC AGAAACTCTT AATAAAATTA AAACCATAAA ACAAAAGATC 
AGGGAGTTAA ATCTCAGTAT TAAAGTTGAA ATCGATGGTG GTATAAATAA TTCGAATGTG 
AAAGATGTTT CCAGGACAGG GGTTGATATT ATTGTGGCTG GTTCTGCTAT TTTTGGTCAA 
CCTGATCCAG GTAAGGCTCT GTCGGAACTA AAAGAAAGAG TAATATCTTC ATAA
 
Protein sequence
MVEFAPSILS ADFSNLKEEV ARVKEANYLH LDVMDGMFVP NITIGPGIIK SIRKHTDLKF 
DTHLMIEEPE RYIKDFAEAG SDIITVHCEA TKHLHRLIYQ IKDQGCLAGV ALNPATSLTR 
IEHVLKDLDL VLIMSVNPGF GGQKLIPETL NKIKTIKQKI RELNLSIKVE IDGGINNSNV 
KDVSRTGVDI IVAGSAIFGQ PDPGKALSEL KERVISS