| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_09750 |
|---|
| Symbol | |
|---|
| ID | 7313468 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | + |
|---|
| Start bp | 1061746 |
|---|
| End bp | 1063377 |
|---|
| Gene Length | 1632 bp |
|---|
| Protein Length | 543 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 643611414 |
|---|
| Product | cobalamin B12-binding domain protein |
|---|
| Protein accession | YP_002508726 |
|---|
| Protein GI | 220931818 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACGAT TAATAATTGG GGCTTCGATT GGAAATTGTG TCCATGTAGC CGGTGTCCTA
AATTTTCTTA GATTAGCTGA AGAACATGGT TATAATACTA AATTCTTGGG GCCCGCAGTG
TCTATTGATT ACCTGTTAGA TGCTGTCCAG GAGTCAAACC CGGAAATGGT AGCAGTAGGA
TACAGGTTAA CTCCGGAAAC CGGCTACAAT TTATTTAAAA GGCTAAAAGA AAGTGTTATT
GAAAGGGGAT TGACCGGCTA TAAATTTGTG TTCGGTGGGA CCCTACCTGT TGCCAGAGAA
GCTAGAAAGG TAGGGCTTTT TGATGCTATC TTTAGTGGTG AAGAAGAACT TGAAGAAATT
ATTGCTTTTC TGGAAGGCAG GGAATTTAAG TCTGAAGATA TCAACTTTGG TGAAAATTTG
CTGGAGAGAA TAGAGATTAA AAAACCATAT CCTGTTATTA GACACCATTT TGGTCTTCCT
TCGGTTGAGA AAACAAGAGA GGGAATAAAG AAGATATCGG AAAGCAAAGT CCTGGATGTA
ATTTCCCTTG GACCTGATCA AAATGCCCAG GAGTCATTCT TCAGGCCTGA AGAGATGGAT
GAAGATGAAA AAGGAGCCGG TGGTGTACCT GTGAGGACAG AACAGGACTT GATCTCATTA
TATGAGGCTA CCAGACGGGG TAATTATCCC CTGATGCGGT GTTATAGTGG TACCCGTGAT
GTATTTAAAA TGGCAGAGAT GCTTTTAAGA ACGATACATA ATGCCTGGGC TGCCATCCCC
CTTTCCTGGT ATAATAGACT TGACGGTAGG GGCCCCAGGG GGCTTCTCGA GTCTATCAGG
GAAAATCAAC AGCTTATGAA ATGGCATGGA GTACGTGATA TACCCGTTGA AGTAAACGAA
TCTCACCACT GGAGTTTGAG AGATGCCCAT GATACTGTAG CCGTGGTTAT GGCTTTTTTA
GCTGCTTATA ATGCTAAACA AATGGGTGTT AAAAACTATA TTGCCCAGTA TATGTTCAAT
AACCCGGCAG GGACTACAGC TTCTATGGAT CTGGCCAAGA TGCTGGCTAA AAAAGAACTT
ATTGAAAGCC TGGTTGATGA TAAGTTCAGG GTATTGACCC AGGTCAGGGC TGGTCTGGCC
AGTTTTCCAC CAAATCTGGA CAGGGCTAAA GGTCAGCTTG CTTATTCAAC CTATTTAGGT
ATGGCTTTGA AACCGGATAT TGTCCATGTT GTAGGGTATT CAGAAGCAGA CCATGCAGCC
ACAAGTTCTG ATGTCATCGA AAGCTGTCAG ATAGCAAGGC AGGTTATAAA TAATTCCATT
TATGGTTATC CTGGAATTGG ATATGATCCT GATATTAAAA AACGTAAAGA TGAACTATTA
AAGGAAGCAG AAATTCTTCT AAATGCTATT AAAAATGTTG CTAATAATGA TGTTGAGGAT
CCGTGGTCTG ACCCTGAAAC CCTGGCCCGT TCTATAAAGA TTGGTTTAAT TGATGCTCCT
CACCTGAAGG GAAATCCTGA AGCAGCCGGA AAACTAACAA CCCGCATGGT AAATGGAGCC
TGTTATGCAT ATGATTATAA CGAAGATAGA ATAATAACAG AAGAAGAGAG AATACAACGC
CTGGGGGGTT AG
|
|---|
| Protein sequence | MERLIIGASI GNCVHVAGVL NFLRLAEEHG YNTKFLGPAV SIDYLLDAVQ ESNPEMVAVG
YRLTPETGYN LFKRLKESVI ERGLTGYKFV FGGTLPVARE ARKVGLFDAI FSGEEELEEI
IAFLEGREFK SEDINFGENL LERIEIKKPY PVIRHHFGLP SVEKTREGIK KISESKVLDV
ISLGPDQNAQ ESFFRPEEMD EDEKGAGGVP VRTEQDLISL YEATRRGNYP LMRCYSGTRD
VFKMAEMLLR TIHNAWAAIP LSWYNRLDGR GPRGLLESIR ENQQLMKWHG VRDIPVEVNE
SHHWSLRDAH DTVAVVMAFL AAYNAKQMGV KNYIAQYMFN NPAGTTASMD LAKMLAKKEL
IESLVDDKFR VLTQVRAGLA SFPPNLDRAK GQLAYSTYLG MALKPDIVHV VGYSEADHAA
TSSDVIESCQ IARQVINNSI YGYPGIGYDP DIKKRKDELL KEAEILLNAI KNVANNDVED
PWSDPETLAR SIKIGLIDAP HLKGNPEAAG KLTTRMVNGA CYAYDYNEDR IITEEERIQR
LGG
|
|---|
| |