| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_09570 |
|---|
| Symbol | fucI |
|---|
| ID | 7313450 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | + |
|---|
| Start bp | 1033962 |
|---|
| End bp | 1035773 |
|---|
| Gene Length | 1812 bp |
|---|
| Protein Length | 603 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643611396 |
|---|
| Product | L-fucose isomerase |
|---|
| Protein accession | YP_002508708 |
|---|
| Protein GI | 220931800 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2407] L-fucose isomerase and related proteins |
|---|
| TIGRFAM ID | [TIGR01089] L-fucose isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAATA AAACAAATTT AAAAATTAAC AAACAACATC GCTTAAGAGG TAATTTACCT
AAAATCGGCA TAAGGCCTGC TATTGATGGT CGTCGCAAGG GAATTAGAGA ATCATTAGAA
GGTCAGACAA TGGGAATGGC TAAAGCTGTG GCTAATTTTT TAGAAGAAAA TCTGAAGTAT
CCAAATGGTA CACCTGTAGA ATGTGTTATT GCTGATACTT GTATAGGTGG GGTAGCAGAA
GCAGCTGCTA CGGCTGAAAA GTTTTCACGA GAAGGTGTTG GAGTTTCGAT TACAGTTTCA
CCATGCTGGT GTTATGGTTC AGAAACAATG GATATGAATC CATTGATACC AAAAGCCATC
TGGGGTTTTA ATGGTACTGA AAGACCTGGT GCAGTTTATT TAGCTGCTCT TAAAGCGGCA
CATGATCAGA AAGGGTTACC TATTTTCCCT ATATATGGAC GTCAAGTTCA GGATGCTGAT
GATAGAAGTA TTCCAGAAGA TGTTCAGGAA AAAATGCTCC GGTTTGCCAA GGCTGGATTA
GCTGTGGCTA TTATGCGTGG TAAGTCTTAT CTGTCTATGG GTTCAGTTTC TATGGGAATT
GCAGGTTCTA TGGTTAATGA AGATTTCTTT CAGGAGTATT TGGGTATGAG AAATGAATAT
GTAGATATGT CAGAATTTAT AAGAAGAATG GAAGAAGAAA TTTATGATAA AGCTGAATTT
AAAAGAGCAA TGAAGTGGGT AAAAGAAAAT TGTAATGAAG GTAAAGATAA CAATCCCCCT
CAAGTTCAAC ATTCTAGAGA GACAAAAGAT GAAGAATGGG AAACAGTAGT TAAGATGACT
TTAATAGCAA GAGATTTGAT GGTTGGTAAT CCCAAACTTG CTGAAATGGG TTATGGAGAA
GAGGCTATGG GTCATAATGC TATAGCCGCA GGTTTTCAGG GTCAAAGACA ATGGACTGAT
CATTTTCCAA ATGGTGACTT TATGGAAGCT ATTTTAAATT CTTCTTTTGA CTGGAATGGA
CTCAGGGAGC CATTTATTAT GGCTACTGAG AATGATACTT TAAATGGAGT ATCAATGTTA
TTTGGTCATT TATTAACTAA TACAGCTCAA ATATTTGCTG ACGTAAGAAC TTATTGGAGT
CCAGAATCAG TTAAGAGAGT AACTGATAAG GAATTAACTG GTAGAGCCCA AAATGGTATT
ATCCATTTAA TTAATTCAGG TTCAGCAACA TTAGATGGGA CCGGTCAGCA AACTAAAAAT
GGTAGGCCTG TGATGAAACC TTTCTGGGAA ATTAGTTCAG AAGAAGTTGA AGCTTGTCTT
GAAGCGACTT CATGGCGACC TGCTATGTTG GATTATTTTA GAGGAGGAGG ATTCTCGTCT
AATTATTTAA CTAAAGGTGG CATGCCATTA ACAATGATTA GAATAAATAT TATTAAAGGA
TTGGGACCGG TCCTCCAGAT TGCTGAAGGT TATTCAGTAG ATTTACCTGA AGACGTTCAT
AGAATTCTGG ATCAGAGAAC TGATCCTACC TGGCCTACTA CATGGTTTGC TCCTATATTG
ACAGGAAAAG GTGCTTTTAA AGATGTTTAT TCAGTAATGA ATAGATGGGG AGCAAATCAT
GCAGCTGTCA GTTATGGTCA TATTGGTGGA GATTTAATTA CTCTAGCTGC TATGCTTAGA
ATCCCTGTTG CTATGCATAA TGTATCAGAA GATAAAATTT TTAGGCCAAG TGCCTGGGAT
GGTTTTGGGA CTAATGATTT AGAGGGAGCA GACTATCGTG CATGCAAGAC TTTTGGACCT
TTATATGGGT GA
|
|---|
| Protein sequence | MSNKTNLKIN KQHRLRGNLP KIGIRPAIDG RRKGIRESLE GQTMGMAKAV ANFLEENLKY
PNGTPVECVI ADTCIGGVAE AAATAEKFSR EGVGVSITVS PCWCYGSETM DMNPLIPKAI
WGFNGTERPG AVYLAALKAA HDQKGLPIFP IYGRQVQDAD DRSIPEDVQE KMLRFAKAGL
AVAIMRGKSY LSMGSVSMGI AGSMVNEDFF QEYLGMRNEY VDMSEFIRRM EEEIYDKAEF
KRAMKWVKEN CNEGKDNNPP QVQHSRETKD EEWETVVKMT LIARDLMVGN PKLAEMGYGE
EAMGHNAIAA GFQGQRQWTD HFPNGDFMEA ILNSSFDWNG LREPFIMATE NDTLNGVSML
FGHLLTNTAQ IFADVRTYWS PESVKRVTDK ELTGRAQNGI IHLINSGSAT LDGTGQQTKN
GRPVMKPFWE ISSEEVEACL EATSWRPAML DYFRGGGFSS NYLTKGGMPL TMIRINIIKG
LGPVLQIAEG YSVDLPEDVH RILDQRTDPT WPTTWFAPIL TGKGAFKDVY SVMNRWGANH
AAVSYGHIGG DLITLAAMLR IPVAMHNVSE DKIFRPSAWD GFGTNDLEGA DYRACKTFGP
LYG
|
|---|
| |