Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_09550 |
Symbol | |
ID | 7313448 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | + |
Start bp | 1031409 |
End bp | 1032911 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 643611394 |
Product | ABC transporter related |
Protein accession | YP_002508706 |
Protein GI | 220931798 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.58805 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAACTATG AAATTGCTGT TAAAATGGAA AAAATAACAA AAGTATTTCC AGGTGTTAAA GCCCTTGATC AGGTTGATTT AGAAGTAAAA AAAGGAGAAG TTCATGTTTT GTTAGGTGAA AATGGTGCTG GTAAATCTAC ATTAATGAAA ATTTTAACAG GTGTGTATTC AAGGACTGAA GGCGAAATTT ATATAGATGG TCAAAAAGTC GAAATTCAGA ATACTAAAAA AGCTATGGAA CTAGGTATAA GTATGATCTA CCAGGAATTT AATTTAGCCC CTCATTTAAA TGTTCAAGAA AATATTTTTC TGGGAAGAGA ACCTTTTAAA AATAAGTTAT TAGGGTATAT AGATGAAGAA AAAATGTATA AAGAAAGTAA AAGAGTATTA AAGAGATTGG GTGTTAATAT ATCTCCTGAA TCTAAAATAA AAGATTTAGG AGTAGCTCAA CAACAAATGG TAGAAATAGC TAAAGCTCTG TCTTTAAATT CAAAAATTAT TATCATGGAT GAACCTACAG CAGCTTTAAC TGACGAAGAA AAAGAAAATT TATTTGAAGT AATTAAACAA TTAAAGAATG AAGGTATTTC AATAATATAT ATATCACATT ATATAGAAGA AATTAATAGG ATCGGAGATC GAGTTACGGT ATTACGAGAC GGGAGAAAAA TTGATGTTGT ACCCGGGTCT ACTGACCCTG ATAAGCTAAT ATCATTAATG GTTGGAAGGG ATGTTGATGA GCTTTTTCCA AAAGAAAAAG TTGATATTAA AGGAGAAACA TTACGGGTGG AAAATATATC CCGGGGAAAA ATTTTGAAGA ATATATCTTT CACTGCAAGA AAAGGTGAAA TTGTTGGTAT TGCAGGTTTG GTGGGGTCCG GGAGGACAGA ATTGCTCAGA GCCATTTTCG GTGCAGACAA AATAGATTCA GGTAAAATAT TTGTTAATGG TAACCAAGTA GAAATAAATT CTCCTGGTGA TGCTATTGAA CTGGGGTTAG CCCTTGTTCC TGAAAGTAGA AAAGAACATG GATTAAACCT GGGTATGAGT GTCAAGGATA ATATTACTTT AACCCATTTA AAAGAATATG TTAACAATAT TTTTATCAAT AACGACAAGG AAGAAAAAGT AGGTAAAGAA TTTGTAAATA ATTTAAGAAT TAAAACACCT TCAATAGAAC AAAAGGTTAA GTATTTAAGT GGTGGTAATC AACAGAAAGT AGTTATAGCC AAATGGCTAT CCAGGAAATG CAATATTTTA TTTTTCGATG AACCTACAAG AGGGATTGAT GTTGGGGCAA AAGCAGAAAT ATTTGAATTG ATGAACCGTC TGGTGTCAAA TGGGGCAACA ATAATTATGG TTTCTTCATA TTTGCCTGAA GTCCTGGCTA TGAGTGATAG AATTCTTGTT ATGTCAAGGG GTGAAATTAC GGGGGAATTA AGTTCAAAAG AAGCGACACA GGAAAAAATT ATGCATTATG CCACTATGAA TGTAATTAAT TAA
|
Protein sequence | MNYEIAVKME KITKVFPGVK ALDQVDLEVK KGEVHVLLGE NGAGKSTLMK ILTGVYSRTE GEIYIDGQKV EIQNTKKAME LGISMIYQEF NLAPHLNVQE NIFLGREPFK NKLLGYIDEE KMYKESKRVL KRLGVNISPE SKIKDLGVAQ QQMVEIAKAL SLNSKIIIMD EPTAALTDEE KENLFEVIKQ LKNEGISIIY ISHYIEEINR IGDRVTVLRD GRKIDVVPGS TDPDKLISLM VGRDVDELFP KEKVDIKGET LRVENISRGK ILKNISFTAR KGEIVGIAGL VGSGRTELLR AIFGADKIDS GKIFVNGNQV EINSPGDAIE LGLALVPESR KEHGLNLGMS VKDNITLTHL KEYVNNIFIN NDKEEKVGKE FVNNLRIKTP SIEQKVKYLS GGNQQKVVIA KWLSRKCNIL FFDEPTRGID VGAKAEIFEL MNRLVSNGAT IIMVSSYLPE VLAMSDRILV MSRGEITGEL SSKEATQEKI MHYATMNVIN
|
| |