Gene Hore_09550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_09550 
Symbol 
ID7313448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1031409 
End bp1032911 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content32% 
IMG OID643611394 
ProductABC transporter related 
Protein accessionYP_002508706 
Protein GI220931798 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.58805 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAACTATG AAATTGCTGT TAAAATGGAA AAAATAACAA AAGTATTTCC AGGTGTTAAA 
GCCCTTGATC AGGTTGATTT AGAAGTAAAA AAAGGAGAAG TTCATGTTTT GTTAGGTGAA
AATGGTGCTG GTAAATCTAC ATTAATGAAA ATTTTAACAG GTGTGTATTC AAGGACTGAA
GGCGAAATTT ATATAGATGG TCAAAAAGTC GAAATTCAGA ATACTAAAAA AGCTATGGAA
CTAGGTATAA GTATGATCTA CCAGGAATTT AATTTAGCCC CTCATTTAAA TGTTCAAGAA
AATATTTTTC TGGGAAGAGA ACCTTTTAAA AATAAGTTAT TAGGGTATAT AGATGAAGAA
AAAATGTATA AAGAAAGTAA AAGAGTATTA AAGAGATTGG GTGTTAATAT ATCTCCTGAA
TCTAAAATAA AAGATTTAGG AGTAGCTCAA CAACAAATGG TAGAAATAGC TAAAGCTCTG
TCTTTAAATT CAAAAATTAT TATCATGGAT GAACCTACAG CAGCTTTAAC TGACGAAGAA
AAAGAAAATT TATTTGAAGT AATTAAACAA TTAAAGAATG AAGGTATTTC AATAATATAT
ATATCACATT ATATAGAAGA AATTAATAGG ATCGGAGATC GAGTTACGGT ATTACGAGAC
GGGAGAAAAA TTGATGTTGT ACCCGGGTCT ACTGACCCTG ATAAGCTAAT ATCATTAATG
GTTGGAAGGG ATGTTGATGA GCTTTTTCCA AAAGAAAAAG TTGATATTAA AGGAGAAACA
TTACGGGTGG AAAATATATC CCGGGGAAAA ATTTTGAAGA ATATATCTTT CACTGCAAGA
AAAGGTGAAA TTGTTGGTAT TGCAGGTTTG GTGGGGTCCG GGAGGACAGA ATTGCTCAGA
GCCATTTTCG GTGCAGACAA AATAGATTCA GGTAAAATAT TTGTTAATGG TAACCAAGTA
GAAATAAATT CTCCTGGTGA TGCTATTGAA CTGGGGTTAG CCCTTGTTCC TGAAAGTAGA
AAAGAACATG GATTAAACCT GGGTATGAGT GTCAAGGATA ATATTACTTT AACCCATTTA
AAAGAATATG TTAACAATAT TTTTATCAAT AACGACAAGG AAGAAAAAGT AGGTAAAGAA
TTTGTAAATA ATTTAAGAAT TAAAACACCT TCAATAGAAC AAAAGGTTAA GTATTTAAGT
GGTGGTAATC AACAGAAAGT AGTTATAGCC AAATGGCTAT CCAGGAAATG CAATATTTTA
TTTTTCGATG AACCTACAAG AGGGATTGAT GTTGGGGCAA AAGCAGAAAT ATTTGAATTG
ATGAACCGTC TGGTGTCAAA TGGGGCAACA ATAATTATGG TTTCTTCATA TTTGCCTGAA
GTCCTGGCTA TGAGTGATAG AATTCTTGTT ATGTCAAGGG GTGAAATTAC GGGGGAATTA
AGTTCAAAAG AAGCGACACA GGAAAAAATT ATGCATTATG CCACTATGAA TGTAATTAAT
TAA
 
Protein sequence
MNYEIAVKME KITKVFPGVK ALDQVDLEVK KGEVHVLLGE NGAGKSTLMK ILTGVYSRTE 
GEIYIDGQKV EIQNTKKAME LGISMIYQEF NLAPHLNVQE NIFLGREPFK NKLLGYIDEE
KMYKESKRVL KRLGVNISPE SKIKDLGVAQ QQMVEIAKAL SLNSKIIIMD EPTAALTDEE
KENLFEVIKQ LKNEGISIIY ISHYIEEINR IGDRVTVLRD GRKIDVVPGS TDPDKLISLM
VGRDVDELFP KEKVDIKGET LRVENISRGK ILKNISFTAR KGEIVGIAGL VGSGRTELLR
AIFGADKIDS GKIFVNGNQV EINSPGDAIE LGLALVPESR KEHGLNLGMS VKDNITLTHL
KEYVNNIFIN NDKEEKVGKE FVNNLRIKTP SIEQKVKYLS GGNQQKVVIA KWLSRKCNIL
FFDEPTRGID VGAKAEIFEL MNRLVSNGAT IIMVSSYLPE VLAMSDRILV MSRGEITGEL
SSKEATQEKI MHYATMNVIN