Gene Hore_09530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_09530 
Symbol 
ID7313446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1028791 
End bp1029813 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content30% 
IMG OID643611392 
Producttranscriptional regulator, LacI family 
Protein accessionYP_002508704 
Protein GI220931796 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.00123183 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTACTA TTTATGATGT AGCTAAGGAA GCGGGAGTTT CACCTTCTAC AGTATCAAGA 
GTTTTAAATA ATTATAATAA TGTAACTGAA ACAACAAGAA AAAAAGTAGA AGCGGCCTGT
AAAAAACTAA AATATGTCCC CAATGCTAAT GCCAGTAGCC TTAAAAAAGA TAATACTAAA
ACATTAGCAT TAATAATTCC AGATATAGAG AATCCTTTTT TTATTTCAAT TTTAAAAGGA
TTTGATGATA AGGCTAATAA GTTAGGTTAT GATACTATTT TATGTAATAC GGATGAAAGG
TTAGAGAAAG AAAAAGATTA TATAAAGATG GTATTAAAAA AAAGAATAGA TGGTGTAGCT
ATAAGTACAG TAGGAAAAAC GAGTGAACAT ATAAGTGAAT TTAGTGATAG AAATATTCCA
TATATATTAT TAGATCGTAA AGTTGAGGGA TTAGATGCAG ATATTGTATG TGGTGATAAT
TATCAAGGTG CAATAGACTT AGTCAACCAT CTTATAAATA ATGGACATAA GGATATAGCT
ATGATTACTG GGCCTTTACA TGTATCAACT AGTAGAGAGA GATTTGAAGG GTATAAAACT
GCTTTAAATA GAGCAGGTAT CAGTGTTGAA GAGGATTATA TTAAAATTGA TTATGTAAGT
CAAGATTATT CTGGAGAAAA AGCTTATGAA ATGACAAAGG AATTATTGGG TTTAAATGAA
CCCCCAACTG CTATATTTGT AGCTAATAAT TTAATGGCCC TGGAAGTTTA TAAAGCTTTG
AAAGAGGAAG GAATATCTGT ACCTGATGAT ATTGCGATAG TGTGTTTTGA TGATCTTAAT
TTAATTTATG AAATAGAGCC GTTCTTTACT GTTATGAAGC AACCTGCTTA TACAATGGGA
GAAGCTGCGG CAGAGATATT AATTAAAAGA ATTGAAATGA GTGATAATGG ACATAGAAAA
AGAAAAATAG TTTTTGAACC AGAATTGATA ATCAGAAAAT CATCCATTAA AGATAGTACG
TAA
 
Protein sequence
MITIYDVAKE AGVSPSTVSR VLNNYNNVTE TTRKKVEAAC KKLKYVPNAN ASSLKKDNTK 
TLALIIPDIE NPFFISILKG FDDKANKLGY DTILCNTDER LEKEKDYIKM VLKKRIDGVA
ISTVGKTSEH ISEFSDRNIP YILLDRKVEG LDADIVCGDN YQGAIDLVNH LINNGHKDIA
MITGPLHVST SRERFEGYKT ALNRAGISVE EDYIKIDYVS QDYSGEKAYE MTKELLGLNE
PPTAIFVANN LMALEVYKAL KEEGISVPDD IAIVCFDDLN LIYEIEPFFT VMKQPAYTMG
EAAAEILIKR IEMSDNGHRK RKIVFEPELI IRKSSIKDST