| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_09530 |
|---|
| Symbol | |
|---|
| ID | 7313446 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | + |
|---|
| Start bp | 1028791 |
|---|
| End bp | 1029813 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 643611392 |
|---|
| Product | transcriptional regulator, LacI family |
|---|
| Protein accession | YP_002508704 |
|---|
| Protein GI | 220931796 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.00123183 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTACTA TTTATGATGT AGCTAAGGAA GCGGGAGTTT CACCTTCTAC AGTATCAAGA
GTTTTAAATA ATTATAATAA TGTAACTGAA ACAACAAGAA AAAAAGTAGA AGCGGCCTGT
AAAAAACTAA AATATGTCCC CAATGCTAAT GCCAGTAGCC TTAAAAAAGA TAATACTAAA
ACATTAGCAT TAATAATTCC AGATATAGAG AATCCTTTTT TTATTTCAAT TTTAAAAGGA
TTTGATGATA AGGCTAATAA GTTAGGTTAT GATACTATTT TATGTAATAC GGATGAAAGG
TTAGAGAAAG AAAAAGATTA TATAAAGATG GTATTAAAAA AAAGAATAGA TGGTGTAGCT
ATAAGTACAG TAGGAAAAAC GAGTGAACAT ATAAGTGAAT TTAGTGATAG AAATATTCCA
TATATATTAT TAGATCGTAA AGTTGAGGGA TTAGATGCAG ATATTGTATG TGGTGATAAT
TATCAAGGTG CAATAGACTT AGTCAACCAT CTTATAAATA ATGGACATAA GGATATAGCT
ATGATTACTG GGCCTTTACA TGTATCAACT AGTAGAGAGA GATTTGAAGG GTATAAAACT
GCTTTAAATA GAGCAGGTAT CAGTGTTGAA GAGGATTATA TTAAAATTGA TTATGTAAGT
CAAGATTATT CTGGAGAAAA AGCTTATGAA ATGACAAAGG AATTATTGGG TTTAAATGAA
CCCCCAACTG CTATATTTGT AGCTAATAAT TTAATGGCCC TGGAAGTTTA TAAAGCTTTG
AAAGAGGAAG GAATATCTGT ACCTGATGAT ATTGCGATAG TGTGTTTTGA TGATCTTAAT
TTAATTTATG AAATAGAGCC GTTCTTTACT GTTATGAAGC AACCTGCTTA TACAATGGGA
GAAGCTGCGG CAGAGATATT AATTAAAAGA ATTGAAATGA GTGATAATGG ACATAGAAAA
AGAAAAATAG TTTTTGAACC AGAATTGATA ATCAGAAAAT CATCCATTAA AGATAGTACG
TAA
|
|---|
| Protein sequence | MITIYDVAKE AGVSPSTVSR VLNNYNNVTE TTRKKVEAAC KKLKYVPNAN ASSLKKDNTK
TLALIIPDIE NPFFISILKG FDDKANKLGY DTILCNTDER LEKEKDYIKM VLKKRIDGVA
ISTVGKTSEH ISEFSDRNIP YILLDRKVEG LDADIVCGDN YQGAIDLVNH LINNGHKDIA
MITGPLHVST SRERFEGYKT ALNRAGISVE EDYIKIDYVS QDYSGEKAYE MTKELLGLNE
PPTAIFVANN LMALEVYKAL KEEGISVPDD IAIVCFDDLN LIYEIEPFFT VMKQPAYTMG
EAAAEILIKR IEMSDNGHRK RKIVFEPELI IRKSSIKDST
|
|---|
| |