Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_09530 |
Symbol | |
ID | 7313446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | + |
Start bp | 1028791 |
End bp | 1029813 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 643611392 |
Product | transcriptional regulator, LacI family |
Protein accession | YP_002508704 |
Protein GI | 220931796 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.00123183 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTACTA TTTATGATGT AGCTAAGGAA GCGGGAGTTT CACCTTCTAC AGTATCAAGA GTTTTAAATA ATTATAATAA TGTAACTGAA ACAACAAGAA AAAAAGTAGA AGCGGCCTGT AAAAAACTAA AATATGTCCC CAATGCTAAT GCCAGTAGCC TTAAAAAAGA TAATACTAAA ACATTAGCAT TAATAATTCC AGATATAGAG AATCCTTTTT TTATTTCAAT TTTAAAAGGA TTTGATGATA AGGCTAATAA GTTAGGTTAT GATACTATTT TATGTAATAC GGATGAAAGG TTAGAGAAAG AAAAAGATTA TATAAAGATG GTATTAAAAA AAAGAATAGA TGGTGTAGCT ATAAGTACAG TAGGAAAAAC GAGTGAACAT ATAAGTGAAT TTAGTGATAG AAATATTCCA TATATATTAT TAGATCGTAA AGTTGAGGGA TTAGATGCAG ATATTGTATG TGGTGATAAT TATCAAGGTG CAATAGACTT AGTCAACCAT CTTATAAATA ATGGACATAA GGATATAGCT ATGATTACTG GGCCTTTACA TGTATCAACT AGTAGAGAGA GATTTGAAGG GTATAAAACT GCTTTAAATA GAGCAGGTAT CAGTGTTGAA GAGGATTATA TTAAAATTGA TTATGTAAGT CAAGATTATT CTGGAGAAAA AGCTTATGAA ATGACAAAGG AATTATTGGG TTTAAATGAA CCCCCAACTG CTATATTTGT AGCTAATAAT TTAATGGCCC TGGAAGTTTA TAAAGCTTTG AAAGAGGAAG GAATATCTGT ACCTGATGAT ATTGCGATAG TGTGTTTTGA TGATCTTAAT TTAATTTATG AAATAGAGCC GTTCTTTACT GTTATGAAGC AACCTGCTTA TACAATGGGA GAAGCTGCGG CAGAGATATT AATTAAAAGA ATTGAAATGA GTGATAATGG ACATAGAAAA AGAAAAATAG TTTTTGAACC AGAATTGATA ATCAGAAAAT CATCCATTAA AGATAGTACG TAA
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Protein sequence | MITIYDVAKE AGVSPSTVSR VLNNYNNVTE TTRKKVEAAC KKLKYVPNAN ASSLKKDNTK TLALIIPDIE NPFFISILKG FDDKANKLGY DTILCNTDER LEKEKDYIKM VLKKRIDGVA ISTVGKTSEH ISEFSDRNIP YILLDRKVEG LDADIVCGDN YQGAIDLVNH LINNGHKDIA MITGPLHVST SRERFEGYKT ALNRAGISVE EDYIKIDYVS QDYSGEKAYE MTKELLGLNE PPTAIFVANN LMALEVYKAL KEEGISVPDD IAIVCFDDLN LIYEIEPFFT VMKQPAYTMG EAAAEILIKR IEMSDNGHRK RKIVFEPELI IRKSSIKDST
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