| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_09460 |
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| Symbol | |
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| ID | 7313439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | + |
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| Start bp | 1019366 |
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| End bp | 1021057 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643611385 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_002508697 |
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| Protein GI | 220931789 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0188478 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAAAA AAGAGAAAAG CTGGTGGAAA GAGGCGGTAG TTTATCAAGT ATACCCGCGT
TCTTTTAATG ATACTACTGG TAATGGTATC GGGGACTTAA GGGGTATTAT TGAAAAGCTC
GATTATATAA AAGACCTTGG TGTTGATGTT ATCTGGTTAA ATCCCGTTTA CGAGTCTCCA
TGTGATGACA TGGGGTATGA TATTAGCAAT TATAGAAAAA TATTACCCCA GTTTGGCACC
ATGGAGGATT TTGATCTTCT CCTCTCTGAA ATGCATAAGC GGGGATTAAA ACTTGTCATG
GATCTGGTAG TGAATCATAC TTCTGATGAA CATCGCTGGT TTGTTGAGTC CAGGAAGTCC
AAAGATAATC CCTACCGGGA TTATTATATC TGGAAAAAGC CAAAAGCTGA TGGTAGCCCT
CCCAACAACT GGGTTTCCTA TTTCGGGGGT TCTGCCTGGG AGTATGATGA ACAAACCGGT
GAATATTATC TCCATCTGTT TTCCAAAAAA CAGCCTGATT TGAACTGGGA AAACCCAAAG
GTCAGAGAAG AAGTAAAGGA TATAATGCGT TTCTGGCTTG ATAAAGGTGT CGATGGATTT
AGAATGGATG TTATTGGATT TATTTCAAAG GATCCTGATT TTGAAGATTT TCCAACTGAT
AATCCCAGTG GGAAGGATCT TGGTGATAAA TATGCCAATG GGCCCAGATT ACATGAATTT
TTACAGGAAC TCCATGATGA TGTTCTTAGT CACTATGACT GTATGACCGT TGGAGAATGC
CCCGGAGTAT CACCTGAAGA TGCCCTGTTA ATAGTTGGTA AAGACAGGCG AGAACTCCAG
ACTCTCTTTC AATTTGAGGG AATGGACATT GATTATGGTA AAAATGGAAG CCGCTTCAGT
ATAGGTAACT GGGATGTTCA TGGTTTTAAA AAAGTATATA CAAAATGGCA TAAAAAGTTA
TATGGTAAGG CCTGGAACAG TATTTATCTT ATGAACCATG ACCAACCACG GGCAGTGTCC
AGGTTTGGTG ATGATAAAAA ATACCGCAAA GAATCTGCTA AAATGTTAGC AACCTTCCTG
CTGTCTATGT GGGGTACCCC CTATATCTAT CAGGGGGAAG AAATAGGTAT GACAAATTGC
CCCTTTGAAG GTGTGGAAGA ATTCCGGGAT ATTGAAATGA TTAATTATTA TAATGAACAG
ATAAGTAAGG GTAAAACTAA GGAAGAAATA ATGCCCGGAT TATTATACAG AGGACGGGAT
AATTCCAGGA CTCCAATTCA ATGGAATGAC TCCAGAAATG CAGTTTTTTC TGATGCTGAA
GAGACCTGGA TAAAGGTAAA CCCCAATTAT ACTGAAATTA ATGTTGAAGA AGCTGAAAAA
GACCCTGATT CAATTCTCCA TTATTTCCGT CGTATGATTA AAACCAGGAA AGATAATGAT
GTTCTAATAT ATGGTGACTA TGAACTGGTA GATGAAGGAA ATGACGATGT GTATGCCTAT
CGAAGATTTC TAGACAATGA AGAAATGCTT GTTCTTCTAA ACTTTACAGA TAAAGAGACA
AGCTGTGATG TTAGCCCTTA TAACTTAGAA GATAAAGAGC TGATTATCTC TAATTATAAG
GGGGGTCAAA AGGTCAAAGG AACTGAAGTG ACTTTAAGGC CTTATGAAGC CAGGATCTAT
AAGATAAAAT AA
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| Protein sequence | MTKKEKSWWK EAVVYQVYPR SFNDTTGNGI GDLRGIIEKL DYIKDLGVDV IWLNPVYESP
CDDMGYDISN YRKILPQFGT MEDFDLLLSE MHKRGLKLVM DLVVNHTSDE HRWFVESRKS
KDNPYRDYYI WKKPKADGSP PNNWVSYFGG SAWEYDEQTG EYYLHLFSKK QPDLNWENPK
VREEVKDIMR FWLDKGVDGF RMDVIGFISK DPDFEDFPTD NPSGKDLGDK YANGPRLHEF
LQELHDDVLS HYDCMTVGEC PGVSPEDALL IVGKDRRELQ TLFQFEGMDI DYGKNGSRFS
IGNWDVHGFK KVYTKWHKKL YGKAWNSIYL MNHDQPRAVS RFGDDKKYRK ESAKMLATFL
LSMWGTPYIY QGEEIGMTNC PFEGVEEFRD IEMINYYNEQ ISKGKTKEEI MPGLLYRGRD
NSRTPIQWND SRNAVFSDAE ETWIKVNPNY TEINVEEAEK DPDSILHYFR RMIKTRKDND
VLIYGDYELV DEGNDDVYAY RRFLDNEEML VLLNFTDKET SCDVSPYNLE DKELIISNYK
GGQKVKGTEV TLRPYEARIY KIK
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