Gene Hore_09440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_09440 
Symbol 
ID7313437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1016560 
End bp1017654 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content35% 
IMG OID643611383 
Productregulatory protein LacI 
Protein accessionYP_002508695 
Protein GI220931787 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.00329545 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGG TAACCCAACA GGATATTGCT GATATGCTTG GTATTTCCAG GACTACTGTT 
GCCCGGGCCT TGAACGGAAC CGGACCAGTG GATGAAAACA CCAGGAAAAA GGTAATAGAA
ACAGCCCGAA AGCTTAATTA TCAAATTAAT CCGATTGCCA GGACCCTGGC CCGTCAGAAA
ACAGTGGGGG TCAGTGTTTT TTGCGCTAAA ACAAGTAATG ATCATTTTAA TCATCATATT
GAAGCTGGTT TTAATCTTGC TTTTAATGAA TTTAAACATT TTGGGGTAAA ATATAATCTC
TACTGGACCA GTACTGAAGA CCCGGATAAA CAGGTTGAAA AAATGTATGC AGTGTTAGAA
AAAGATAAAG ATATAGATGG GGTAATTGTT ATGCCTTTGA ATGTGGAGAA AGTTAAAGAA
ATCGCCCGGG TCTGTAAAGA AAAAAATATT GAATTTGGTA CGGTAAATAT GGATATTGAT
TGTGATGATA GATTATTTTT TGTTGGTAAT GATGACTATA GTGGAGGGAG AATAGCAGGT
GACATTTTAT CTAACCTCCT TACTGGAAGA GGCAATATAG CCATTATAGG GTCTGTTTAT
CAGTATGTTT CTTCTTATAA AAGGCTTAAG GGTTTTATGG ACATTGTAAT GGAAAGATCT
CATCTCGATA TAAGTACCTG GCAGAATGTT AAAGACCTGG ATGAAGCCTA TAAAATAACC
AAACAGATAC TTAAGGAAAA GACAGACATA CATGGGATTT TTACTACAGT AGAAATTCTT
TATGTAGCCC GGGCCCTTAA AGAATTGGGT AAAAGAGATG TAGTTTTAGT GGGTTATGAT
CTTAATAAAA AAGTGAAGTC TTACATTAAG CAAGGAATTA TTAATTCGGT GTTGTATCAA
CGCCCCTTTC TTCAGGGGTA TCTTGCCCTT AAGTATATGT TAAACTATTT AATTTATGAA
AATACTACCC CCACTAAAGA AGTGACCATT GGATATGATA TAGTTACTAA AGAGAATTTA
AAGGTGGAGG AGCTTTATTT AAAAAACTTT TTACAACAAC CTGTTTATGA TACTGAGAGA
ACCCAAATTA AATAG
 
Protein sequence
MKKVTQQDIA DMLGISRTTV ARALNGTGPV DENTRKKVIE TARKLNYQIN PIARTLARQK 
TVGVSVFCAK TSNDHFNHHI EAGFNLAFNE FKHFGVKYNL YWTSTEDPDK QVEKMYAVLE
KDKDIDGVIV MPLNVEKVKE IARVCKEKNI EFGTVNMDID CDDRLFFVGN DDYSGGRIAG
DILSNLLTGR GNIAIIGSVY QYVSSYKRLK GFMDIVMERS HLDISTWQNV KDLDEAYKIT
KQILKEKTDI HGIFTTVEIL YVARALKELG KRDVVLVGYD LNKKVKSYIK QGIINSVLYQ
RPFLQGYLAL KYMLNYLIYE NTTPTKEVTI GYDIVTKENL KVEELYLKNF LQQPVYDTER
TQIK