Gene Hore_09390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_09390 
Symbol 
ID7313432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand+ 
Start bp1012608 
End bp1013543 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content43% 
IMG OID643611378 
ProductOrotidine-5'-phosphate decarboxylase 
Protein accessionYP_002508690 
Protein GI220931782 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0284] Orotidine-5'-phosphate decarboxylase 
TIGRFAM ID[TIGR02127] orotidine 5'-phosphate decarboxylase, subfamily 2 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.00166281 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTCCT TTATAGATAG GTTAATAGAA AAGGTGAAAA AAAAGCGGAG TCATGTCTGT 
GTTGGACTGG ATCCCCACCT TGAGCAGTTG CCCAAGCACC TGATGAATAA AGCCCGGGAA 
AAGGTAAAAG GAGATAACTC CAGGCAGGTG GCCTTGGGAC TTGCCATCTG GTGGTTTAAT 
AAAACCATAA TTGATAATAT TTATGATATA GCAGTAGCGG TAAAACCCCA GGTTGCCTTT 
TATGAAAAGG TAGGTTCATC GGGGATGCTG GCATTAAAAG AAACGGTCCA GTATGCCAGG 
CAAAAAGGTT TGCTAGTAAT ACTTGATGGG AAAAGAAATG ATATAGGTTC AACAGCAAGG 
GCATATGCAG AAGCCTATCT AAAGGGGCAG GGTCTCGATA ATTCAATTCA GGCGGATGCC 
ATTACTGTAA ATCCCTATCT CGGGGTTGAT GGGATTAAAC CTTTTATAGA AAATAAAGAG 
AACGGGGCTT TTGTGTTAAT AAAAACATCT AACCCCAGCT CCGGTGATTT GCAGGATTTA 
GTCTTAAAAG ATGGGAATAA ACTCTATCAG AAAATGGGCC AGTATGTGTC TGAGTGGGGA 
CAAAATAGTA TTGGGGAGAA TGGTTATTCT AATCTGGGGG CAGTAGTTGG TGCCACTTAT 
CCAGAGGAAC TTAAAATTCT CAGGTATGAG ATGCCACACA GCTATTTCCT GATTCCAGGA 
TTCGGGGTTC AGGGTGGGAG TGTCTTAGAT GTAGTTAACG GTTTTAATGA TGATGGACTG 
GGGGCTATAG TTAACTCCTC CAGGGGTATT ATCTTTGCCT ATCGTAGAGA ACCATGGTCT 
GGCAGGTTTG TTGAAAAGGA ATTTGGACTC GCTGCCAGAG CAGCTGCTCT GGATATGAAG 
GACAAAATAA ATTCAGCCTT AGGAGGGAGA AGATAG
 
Protein sequence
MKSFIDRLIE KVKKKRSHVC VGLDPHLEQL PKHLMNKARE KVKGDNSRQV ALGLAIWWFN 
KTIIDNIYDI AVAVKPQVAF YEKVGSSGML ALKETVQYAR QKGLLVILDG KRNDIGSTAR 
AYAEAYLKGQ GLDNSIQADA ITVNPYLGVD GIKPFIENKE NGAFVLIKTS NPSSGDLQDL 
VLKDGNKLYQ KMGQYVSEWG QNSIGENGYS NLGAVVGATY PEELKILRYE MPHSYFLIPG 
FGVQGGSVLD VVNGFNDDGL GAIVNSSRGI IFAYRREPWS GRFVEKEFGL AARAAALDMK 
DKINSALGGR R