Gene Hore_09320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_09320 
Symbol 
ID7313425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand+ 
Start bp1005136 
End bp1005573 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content35% 
IMG OID643611371 
Productlipoprotein signal peptidase 
Protein accessionYP_002508683 
Protein GI220931775 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0597] Lipoprotein signal peptidase 
TIGRFAM ID[TIGR00077] lipoprotein signal peptidase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.00061275 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTATATA TTGTTGTTTT AATAGTTATA TTACTTGATC AGATGGTTAA ATTATTAGTC 
ATGGAAAAAA TGAAGGTTTC AGAATCTATA CCGATTATAA AGGATGTTTT TCATCTTACC 
TATGTTCAAA ACCGGGGGGC AGCCTTCGGG ATTTTACCCG GCCGGAGGTA TTTATTTATA 
GTCATTACTG TAGTTGTAAT CTCTTTTCTG TTAATTTATT ATTATAAAAC CAGGGGCTCT 
GGAATGGTTA CCCTGTCTAC AGGATTAATA ATTGGTGGTG CCCTGGGTAA TTTAATTGAC 
CGTATTAGAT TTGGTTATGT GGTTGATTAC CTTGATTTTA GAATATGGCC TGTTTTTAAT 
CTGGCTGATT CTTCTGTTGT AATTGGGGCG GCACTTTTAA TACTGTATCT CTGGCAGCAG 
GAAAAAGTAG GTGATTAA
 
Protein sequence
MVYIVVLIVI LLDQMVKLLV MEKMKVSESI PIIKDVFHLT YVQNRGAAFG ILPGRRYLFI 
VITVVVISFL LIYYYKTRGS GMVTLSTGLI IGGALGNLID RIRFGYVVDY LDFRIWPVFN 
LADSSVVIGA ALLILYLWQQ EKVGD