| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_09300 |
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| Symbol | |
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| ID | 7313423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | + |
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| Start bp | 1002906 |
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| End bp | 1003592 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643611369 |
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| Product | transcriptional regulator, TraR/DksA family |
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| Protein accession | YP_002508681 |
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| Protein GI | 220931773 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1734] DnaK suppressor protein |
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| TIGRFAM ID | [TIGR02420] RNA polymerase-binding protein DksA
[TIGR02890] sporulation protein, yteA family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00000204402 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATAGGA CAAAAGAGAA AAAATACCGT CAATTATTAA TAAATGAAAA AAATAGTTTA
TTACATGAGC TAAAACATTT TTCTGATGAC GAGTTTGCCA GTGTTAAGGA CTCAACCGGA
GAATTATCCA GTTACGATAA TCATCCAGCC GATCAGGGAA GTAATACCTA TGACCGGGAG
AAAGACAGAG GTTTAAGGGA TAATGCACAG GTATTATTAA ATAAAGTCGA AAACGCCCTT
AACAGGCTAG AAGAAGGTAA TTATGGATTG TGTGAAAAAT GTGGCCAGGA GATAAGGGAG
GAAAGACTGG AAACCATTCC TTACGCAACC CTGTGTGAGC GTTGTCAGGC GAAAGAGGAA
GGGAAGGATT ATAACAGGGA CCGCCCCCTT GAAGAAGAAA ATTTGACTCC TCCCTTTGGT
AGAGGGTTCT ATGACGAGAC AAATTATAAT GCCTATGATG CTGAGGATAC CTGGCAGGAT
GTGGCCCAGT ATGGAACTTC CAATACACCC CAGGATGTCC CTGAAGAGAC TTCAGGGACG
GGGGCAGAGG CTTATATTGA TTCAGAAGAG ACTGTTGGGT CAGTTGGATT TGAAGATAGT
ATCATTGATG ATGAAGCAGA TAATTTAGAA GAGGCATCTG AAAAAGAGAG TACTTTTACC
GGGGAAAAAG GAAAGGATAA AAAATAG
|
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| Protein sequence | MDRTKEKKYR QLLINEKNSL LHELKHFSDD EFASVKDSTG ELSSYDNHPA DQGSNTYDRE
KDRGLRDNAQ VLLNKVENAL NRLEEGNYGL CEKCGQEIRE ERLETIPYAT LCERCQAKEE
GKDYNRDRPL EEENLTPPFG RGFYDETNYN AYDAEDTWQD VAQYGTSNTP QDVPEETSGT
GAEAYIDSEE TVGSVGFEDS IIDDEADNLE EASEKESTFT GEKGKDKK
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