Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_09280 |
Symbol | |
ID | 7313421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | - |
Start bp | 1000866 |
End bp | 1002227 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643611367 |
Product | MATE efflux family protein |
Protein accession | YP_002508679 |
Protein GI | 220931771 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00000476954 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGTTAA TCAATGAAAT AAACCGAAGA AAAGAAATGA TAAAAAATAT ACTTGTCCTG GCCTTTCCGG CAGTAATGGA AATGAGCCTC AATACCATGC TGGGGTTTGC CGATACCTTG ATGATTAGCC GGATAATTGG AAAAGAAGGT CTTGCTGCCG TAGGTTTTGC CAATCAAATT ATTTTTACCC TGATATTTAT ATTTTCCTCT TTCAATGCTG GAGCCACAGC TATGGTGGCC AGAAGCTATG GTGAGAAAAA TTATAAACGT TTGAATAAGA TTGTCGGTGA AAATTTAACC CTAAACCTGT TTATTGGCAT TATTATTTTT ATGGCATCCT ACTTTTATGG AGATCAAATT CTTAAAGTAT TTGATATCTC AAAAAACGTA TACCAGATGG GGCTTAGCTA TCTAAAAGTT GTCTCATTCA GTCAGTTATT TATGTTTATT TCGTTTGCGG CCGCTGCCAG CCTCAGGGGA GCGGGAGACA CCAAAACACC AATGTATATA ACCGGTATGG CTAACATTTT AAATATCTTT GGGAACTATG CCCTGATGAC AGGTTTCTAT GTCTTCCCCG AGCTCGGTAT AGCCGGGGCT GCCCTTTCTA CAACTATTTC CCGGGCTATT GCTGCCTTTT TGTACCTTTA TATTTTAATA TCAGGCGAAA GAAAGATTAA ACTTCATTTC CATAGTCTCA GGATTTCTAC TTATATTATA AAACCCCTCT GGAAGTTAAG TTATGCTGCC GCCCTGGAAC AATTTTTTAT GCAGCTGGCT TTTTTTACTA ATGGTATAAT TATTTCAAAA CTGGATACAA CATCAGAAGC AGCTTTCAGA ATACTAATAA ATATTGAATC AACCTCATTT ATGCCGGCCA TCGGAATAGC TATAGCCACT ACAACCCTGG TGGGGAAACA CCTTGGAGAA AAAAATCCTG AAAAATCCCT GGATACCGGG TATACTGCTG CCCTGCTGGG AATAGTCTGG GGTATTTTTA TGGGAACTAT TTTCTTCCTG TTACCGGTAC CAATACTCAG TATTTTTACC AGTGAATCTC CTTTGATATC AAGGGCCATT AATTCTCTTA AGATTGCCGG TTTTAATCAA CCCCTCCTGG CTTTTATGAT CATTATGGCC GGGGCTCTGA GGGGAGCCGG TGATACCAGG GGAGCCATGA TCTTGACATC ATTAAGACTC TGGACTATTT TTATTCCTTT ATCCTATGTC TTTGCCATCA TTTTACAATA TGGAGTAGCC GGAGTCTGGA TAGCAGAAAT AAGTTCCTTT ATAATTTTCT CAATACTAAT AAATCGCCGC TTTAAATCTA TGAAATGGGC TAAAATAAAA ATATTTGATT AA
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Protein sequence | MLLINEINRR KEMIKNILVL AFPAVMEMSL NTMLGFADTL MISRIIGKEG LAAVGFANQI IFTLIFIFSS FNAGATAMVA RSYGEKNYKR LNKIVGENLT LNLFIGIIIF MASYFYGDQI LKVFDISKNV YQMGLSYLKV VSFSQLFMFI SFAAAASLRG AGDTKTPMYI TGMANILNIF GNYALMTGFY VFPELGIAGA ALSTTISRAI AAFLYLYILI SGERKIKLHF HSLRISTYII KPLWKLSYAA ALEQFFMQLA FFTNGIIISK LDTTSEAAFR ILINIESTSF MPAIGIAIAT TTLVGKHLGE KNPEKSLDTG YTAALLGIVW GIFMGTIFFL LPVPILSIFT SESPLISRAI NSLKIAGFNQ PLLAFMIIMA GALRGAGDTR GAMILTSLRL WTIFIPLSYV FAIILQYGVA GVWIAEISSF IIFSILINRR FKSMKWAKIK IFD
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