Gene Hore_09170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_09170 
Symbol 
ID7313410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand+ 
Start bp991459 
End bp992142 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content33% 
IMG OID643611356 
ProductSporulation stage II protein R 
Protein accessionYP_002508668 
Protein GI220931760 
COG category 
COG ID 
TIGRFAM ID[TIGR02837] stage II sporulation protein R 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.00000000000123229 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTAT TGAAAGTTAT AACCGGACTA ATATTTTTAA CTGTTGTATT ATTGAGTATA 
AATGCAAATA GCGCCTATGT AATTAAAGAT ACTTCTGATC TTATTAATGC CTATAATAAC 
AATAATCTAG TTCGATTCCA TGTAGTTGCC AATAGTAATT CACCTGAGGA TCAATATATA 
AAAAGACAGG TCAGGGATGA AGTAATAAAG TATATGTCAA GAACCAGCCC TGACGGGTTA 
AAGAAACAGG TTAGTAAGAC ACGTTTACAG GAGATTGAAG AATTTACAAA TAACCTCCTT 
ACGAATGAAG GCGTGGATTA CCGGGCCCGG GTTCAATATG GAAGATTTTA TTTTCCGAAA 
AGGACGTACG GGAAACTTAC ATTACCAGCA GGAGATTATA ATGCCCTGAA AATAATTCTT 
GGTAAAGGAC AGGGAGCAAA CTGGTGGTGT GTTTTGTTTC CACCCCTTTG TGTCCAGGAA 
AAAAATCAAT CTGCTTCAGT ATCAGGGAGT ATAAAATCAT CAAAAATTGA GTTCAGGTTT 
AAAATTTTGG AGCTTTTACA GGATAATAAG AAGAAAATTA ATGATATAAA ACTGACCCGT 
ATTTTAATAA ATAAACTGGA GCTGAATAAA TTTATTTATA GAGAAAAATT TATAGATAGT 
CAGCCAGAGG GGGTTTATAA TTAA
 
Protein sequence
MKVLKVITGL IFLTVVLLSI NANSAYVIKD TSDLINAYNN NNLVRFHVVA NSNSPEDQYI 
KRQVRDEVIK YMSRTSPDGL KKQVSKTRLQ EIEEFTNNLL TNEGVDYRAR VQYGRFYFPK 
RTYGKLTLPA GDYNALKIIL GKGQGANWWC VLFPPLCVQE KNQSASVSGS IKSSKIEFRF 
KILELLQDNK KKINDIKLTR ILINKLELNK FIYREKFIDS QPEGVYN