Gene Hore_09070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_09070 
Symbol 
ID7313400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp979905 
End bp981275 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content38% 
IMG OID643611346 
ProductUDP-N-acetylmuramoylalanine--D-glutamate ligase 
Protein accessionYP_002508658 
Protein GI220931750 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase 
TIGRFAM ID[TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.562378 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGATG TAAGTAGCAA AAAAGTTGCC GTTATAGGTT TAAGTAAAAG AACCGGTGTT 
TCAGTAGCCA GAACACTTGT AAACTGCGGG GCAGAGGTCA TTGTTTCTGA TATAAAAGAG
AAAAAAGACC TTAAGGACGA AATTGAAATG TTAAATGAAT ATGAGGTTGA ATTTGATCTG
GGTGGTCATT CAAATAAATT ACTGGATGTT GATTTAATAA TAGTCAGTCC CGGTGTCCCC
CTTAATCTGC CATTTTTTAA AAGTATTTCT GAAAAAGGGA TACCTGTTAT CAGTGAAATA
GAGTTTGCCT ATCATCTTAC TGAAGCAAAC ATTATTGCCA TTACCGGAAC AAATGGCAAG
ACGACTACTA CTGCTTTAAC TGGTGAGATA TTGGATAAAG CAGATATTGG AGAAGTCAGG
GTTGGTGGTA ATATTGGAAA GCCATTAATT GATGTGGTTC AGGGACTGAA GAAAAATGAC
TGGGTGGTGG CAGAAGTTAG CTCATTTCAA CTGGAAACAA TCAGGGATTT TAAACCCCAT
ATCAGTGCCT TTTTAAATTT TTCCCCTGAT CATCTGGATA GGCACTTGAG TGTGGAGAAT
TACTGGAAAG CTAAAAAAAG GATTTTTGAA AACCAAATGT CCGGTGATTA TGCCCTTGTC
AATTATGATG ATTATAAGGT ACTAAAAGCA GTTGAAGATT GTTCAGCGAG AGTTTTTGGT
GTTTCTTTAA AAGACAATAT AGAACAGGGT ATATACCTTG AAGAAGATAA ATTAATTATT
AATTCAGCAG ATAGAAGTGA AGTTGTCTTA CCTGTTGAGA GCATTCCTTT AAAGGGTAAA
CACAATATAT ATAATATAGC CTTTGCTTCC CTGATAGCTT ACCTGGCAGG GGCTAGTACT
GAAGCTATAA AAGAAGGGGT TTATCAGTTT ATACCTGAAC CTCATAGACT TGAAGAGGTT
ACAGTGCTGA AAGATAGGGT TATGGTTATA GATGATTCCA AGGCAACAAA TCCCCATGCG
GCTATTAATG CCCTTAAGTC CTTTGATCAA CCTATTGTTT TGATAGCAGG TGGTCAGGAT
AGAGATGCTG ATTTTTCTGA ATTTGCCAGG GAAATTGTGT CCCGGGTCAG GGCTCTGATT
CTGTTAGGGG AGACAAAAGA TAAACTGGCA GAAACTGTAT TAAGGATGGG ATTTAATAAT
ATATATAAAG TAAGGGATAT GAATGAAGCA GTGAGAAAAG CAATTGCCCA TACCGAACCA
GGTGATGTAT TATTATTATC CCCCGGATGC CCCAGCTGGG ATATGTATGA CAGTTATAAA
AAAAGGGGCC AGGAGTTCAA GGAGGCAGTT AATAAGATAA GGGGGAGTTA G
 
Protein sequence
MIDVSSKKVA VIGLSKRTGV SVARTLVNCG AEVIVSDIKE KKDLKDEIEM LNEYEVEFDL 
GGHSNKLLDV DLIIVSPGVP LNLPFFKSIS EKGIPVISEI EFAYHLTEAN IIAITGTNGK
TTTTALTGEI LDKADIGEVR VGGNIGKPLI DVVQGLKKND WVVAEVSSFQ LETIRDFKPH
ISAFLNFSPD HLDRHLSVEN YWKAKKRIFE NQMSGDYALV NYDDYKVLKA VEDCSARVFG
VSLKDNIEQG IYLEEDKLII NSADRSEVVL PVESIPLKGK HNIYNIAFAS LIAYLAGAST
EAIKEGVYQF IPEPHRLEEV TVLKDRVMVI DDSKATNPHA AINALKSFDQ PIVLIAGGQD
RDADFSEFAR EIVSRVRALI LLGETKDKLA ETVLRMGFNN IYKVRDMNEA VRKAIAHTEP
GDVLLLSPGC PSWDMYDSYK KRGQEFKEAV NKIRGS