| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_09050 |
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| Symbol | |
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| ID | 7313398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | + |
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| Start bp | 977483 |
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| End bp | 978868 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643611344 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
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| Protein accession | YP_002508656 |
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| Protein GI | 220931748 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATACCAA TGAGTCTGGC TGAGATTAGA AATGCTGTTT CTGGAAAAAT AATTCAGGGA
GACCCCAAGA GTAAAATAAC TGATATATCT ATAGACAGTA GGACTATTAA TCCTGGTGAT
ATGTTTGTTG CCATTATTGG GGAACGTTTT GATGGTCATA GTTTTATTCC TGAAGCGGTT
TCGAAAGGGG CCAGAGCTTT AATTGTGGAT CACAGTATAA AGGCCTATCC AGGGGTAGGA
ATCATCCTTG TCGAGGATAC TACCAGGGCC CTCCAGGATC TGGCCCGGTA TCACCGGATG
TTAATAAAGG GTTTAACGGT AATCGGTATA ACCGGTAGTG CCGGCAAAAC TACTACCAAA
GATATGATTG CTTCAGTATT GAAGGAAAAA TATAATGTTA CTAAAACCAG GGGTAATTTA
AATAATTACT ATGGTCTTCC CCTGACATTG CTTTCATTAG ATGGGGATGA GGAGATTGCT
GTCCTCGAAA TGGGAATGAG TAAACTGGGG GAGATAGAAC TTCTGGCCAG TATTTCCAAA
CCAGATATAG GTGTTATCAC TAACGTGGGT CCCACTCATC TTGAAAATTT AAAGACAGTC
GGTAATGTGG CCCGGGGTAA GAGGGAGTTG ATAGAAGGAC TTCCTACCAA TGGTCTGGCA
ATTCTTAACT ATGATAACAA ATATGTCAGG GACATGAAGG ATTATGTAGA GGGGAAAAAA
GTAATATATT ATGGGTTTTC TCCTGAGGCC GATGTTTATG CTGAACACAT AAAAGTTGAT
GAAAAAAATA AAAATATAAG TTTTATTGCC CATTATAAGA CCGAAAAAGA AAGAATTACT
TTACAAAAAC CGGGAAAGCA TAATGTCTAT AATGCCCTGG CGGCCATCGC AGTAGCCCGT
TATTTAAGGG TGGACTGGGG TGGTATAAAA AATGGTCTGT ATAATATTGA TCTGTCATCA
TTAAGATGGG ATGTCAGAGA TTTAGGTAAC GAGATTACCC TGATAAACGA CACCTATAAT
GCCAATCCTC TTTCCATGAA AGCTGCTATT GAGGCCACTT TTGATATAGC ACAGGAAAGA
GTGATAACCG TTCTTGGAGG TATGCTCGAA CTCGGCGACA TGGAAGAGAA GGCCCATGTT
GACCTTGGTA GATATGTTGC AGAAAGAAAT GTAGATGTTT TAATTACAGT TGGAGAACTG
GGGAGGTTGA CGGCCAGGAG TGCCGAAAAA GAGGGTATGA AGAACGTTTA TCAGGCTGAT
AATAATCAGG AAGCCTCCAG AGTGTTACTG GATTTAATAA AAAAAGGTGA TACAATTTTG
GTTAAGGGTT CAAGAGGAAA CAAAATGGAA GAAATAGTTA AGATGGTCAG TTCACAGGAG
GATTAA
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| Protein sequence | MIPMSLAEIR NAVSGKIIQG DPKSKITDIS IDSRTINPGD MFVAIIGERF DGHSFIPEAV
SKGARALIVD HSIKAYPGVG IILVEDTTRA LQDLARYHRM LIKGLTVIGI TGSAGKTTTK
DMIASVLKEK YNVTKTRGNL NNYYGLPLTL LSLDGDEEIA VLEMGMSKLG EIELLASISK
PDIGVITNVG PTHLENLKTV GNVARGKREL IEGLPTNGLA ILNYDNKYVR DMKDYVEGKK
VIYYGFSPEA DVYAEHIKVD EKNKNISFIA HYKTEKERIT LQKPGKHNVY NALAAIAVAR
YLRVDWGGIK NGLYNIDLSS LRWDVRDLGN EITLINDTYN ANPLSMKAAI EATFDIAQER
VITVLGGMLE LGDMEEKAHV DLGRYVAERN VDVLITVGEL GRLTARSAEK EGMKNVYQAD
NNQEASRVLL DLIKKGDTIL VKGSRGNKME EIVKMVSSQE D
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