Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_08980 |
Symbol | |
ID | 7314894 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | + |
Start bp | 969420 |
End bp | 970451 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643611337 |
Product | D-alanine--D-alanine ligase |
Protein accession | YP_002508649 |
Protein GI | 220931741 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 60 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGTAAAT TAAGGCTTGG AGTTTTGTTT GGGGGACGCT CTCAGGAACA TGAAGTTTCT GTTATGTCGG CCAGGTCAGT TGTCAAAATG GCCAAAAAAG AAAAATATAA GGTAATTCCC TTTGGTATAA CCAAAAAAGG TCAATGGGTC GGACCCGAGG AATCGTGGAA TATACTGAAC AATGGAATAA ATGAAGTTAA AGCCAGTAAA GATAGGTGTA TTACAGAGAG TGTCAGGGTA TTCCTGGATC ACAAACTGGA TATTGTTTTT CCTGTTTTAC ACGGTCCTTA TGGAGAGGAT GGCAAGCTTC AGGGATTTTT AGATTGTCTT GATATCCCCT ATATAGGAGC CAGTGTTTTA TCTTCGGCAG CCGGTATGGA TAAGGAAATA ATGAAAAACT TATTTAGCTA TCATAAAATT CCCCAGGCCA GATACAGGGT TTATCGACAG AATCATTTAG AAAATGGACT GGATGGCATT ATCTCAGAAA TAGATCGATT TTTAGGATGG CCCTGTTTTG TTAAACCGGC TAATATGGGA TCAAGCATCG GGGTCAGCAA GGTTCATTCT CCTGGGGAAG TAAAAAAGGC CCTGGAAAAG GGATTTTATT ATGACCGTAA ACTTATTTTT GAAGAATTTG TAGAGGGGCG AGAAATAGAG TGTTCAGTGC TGGGTAATGA CCAGGTTGAA GCTTCACTAC CCGGTGAAAT TCTTCCCGGA AAAGAGTTTT ATGATTACGA AGCTAAATAT AAAGATAACA AAACCCGACT GGTGATACCT GCCTCTCTGG ATGAAAGTGT TATTGATAAG GCCAGAAACC TGGCAATTAA AGCTTTTAAA GCTATTGATG GTAATGGGTT TGCCAGAGTT GATTTTTTCT TAAAGAATAA CGGAGTGCTT TTAGTAAATG AGATTAATAC AATACCTGGT TTTACTCAAT ATAGTATGTA CCCCAAATTA TGGGAAGCAA CCGGTCTTAA CTACCCTGAT TTAATAGATA AATTAATAGA ACTTGCCCTG GAGGACAGAT AG
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Protein sequence | MSKLRLGVLF GGRSQEHEVS VMSARSVVKM AKKEKYKVIP FGITKKGQWV GPEESWNILN NGINEVKASK DRCITESVRV FLDHKLDIVF PVLHGPYGED GKLQGFLDCL DIPYIGASVL SSAAGMDKEI MKNLFSYHKI PQARYRVYRQ NHLENGLDGI ISEIDRFLGW PCFVKPANMG SSIGVSKVHS PGEVKKALEK GFYYDRKLIF EEFVEGREIE CSVLGNDQVE ASLPGEILPG KEFYDYEAKY KDNKTRLVIP ASLDESVIDK ARNLAIKAFK AIDGNGFARV DFFLKNNGVL LVNEINTIPG FTQYSMYPKL WEATGLNYPD LIDKLIELAL EDR
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