Gene Hore_08870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_08870 
Symbol 
ID7314877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp955560 
End bp956015 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content41% 
IMG OID643611320 
Producttranscriptional regulator, BadM/Rrf2 family 
Protein accessionYP_002508638 
Protein GI220931730 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.6739600000000002e-18 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAT CCACCAGGGG TAGATATGGA CTAAGAGCAA TGGTTGACCT TGCCATCCAC 
CAGGATTCGG GTGCAATTCC CTTAAGGGAA ATTGCGGAGA GACAACAGAT ATCTGAGCAG
TATCTGGAAC AACTTTTCGC CAATTTACGT AAAGCAGGGC TTGTTAAGAG TGTGAGAGGG
GCCCATGGCG GTTATTTGTT AAATCGTGAT GCTGATGAAA TTACTGCTGG AGATGTACTT
CGAACCCTCG AGGGTCCTAT TGCACCGACC GACTGTGTTC TCGATAATGA CGAAGATGTC
TGTAGTTTAA TAGATAAATG TGTTACCCAT GAATTGTGGG TAAAATTACA GAAACAGGTA
AGTGAAATCC TTGACTCGGT TACTTTAAGA GACTTACAGG AAAGGGCAAA AGAACTAATA
CGTAATAAAA ATAAAGGTTT GATGTATCAT ATCTGA
 
Protein sequence
MKISTRGRYG LRAMVDLAIH QDSGAIPLRE IAERQQISEQ YLEQLFANLR KAGLVKSVRG 
AHGGYLLNRD ADEITAGDVL RTLEGPIAPT DCVLDNDEDV CSLIDKCVTH ELWVKLQKQV
SEILDSVTLR DLQERAKELI RNKNKGLMYH I