Gene Hore_08780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_08780 
Symbol 
ID7314865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp945123 
End bp946664 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content39% 
IMG OID643611308 
ProductABC transporter related 
Protein accessionYP_002508629 
Protein GI220931721 
COG category[R] General function prediction only 
COG ID[COG3845] ABC-type uncharacterized transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000334619 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAATG GTGACCCGGT CATCCAGATG AACGGTATAA CTAAAAGGTT TCCTGGAGTT 
GTAGCCAATG ATAAAGTTGA TTTCGAATTA AAAAAAGGCG AAATTCACGC CCTACTGGGG
GAAAACGGGG CAGGGAAGAC AACTTTGATG AAATGTCTTT ATGGTTTATA TCAGCCAGAT
GAAGGAGATA TATTTATTAA TGGTAAAAAG GTTTCTATTT CTGACCCCAA TGATGCTATT
AACCTGGGAA TTGGAATGGT TCATCAACAT TTTATGCTGG TTCCTCCGTT TACTGTTGCT
GAAAATATTG TCCTCGGGAG TGAACCGGTT AGAAATTATC AGCTTGACTA CGAAAAAGCA
GTTAAAGATG TAAAGCAGTT GTCAAAACGG TATAAACTAA ACGTTGACCC TGAGGCAAAA
GTTCAGGATA TAAGTGTCGG TATGCAACAG AGGGTAGAGA TTCTTAAAGC CCTTTATAGA
GGGGCGGATA TTTTAATCCT TGATGAACCA ACAGCTGTTC TGACTCCGCA GGAAGTTGAT
GAATTAATTG ATATTATGAG GAGCCTAACA GAAGAAGGAA AATCTATAAT ATTTATCACC
CATAAATTAA AGGAAGTAAA GGCAATAGCT GACAGGGTAA CGGTTATTCG CAGGGGAAAA
TTAATAAATA CTGTTGAAGC TGATTCTGCG ACCTCAGAAG ACCTTGCCAA AATGATGGTT
GGCAGGGAAG TACTTTTAAG GGTAGAGAAA GAAAAAGCAA ACCCCGGTGA AGTTATCCTG
GAAGTAAGTA ATATAAAAGC CAGAAATGAC AGAGGATTAA TGGCCCTTAA CGGGACAAGT
TTTTCTGTAC GCAGGGGAGA AATTCTGGGA ATTGCCGGTG TAGAGGGTAA TGGCCAATCT
GAACTGGCCG AAGTATTAAC CGGGTTAAGA GAGATTGAAG ATGGAGAGAT ATATCTTAAA
GGTAAAAATA TAGCAAGCTA TTCTACCCGT CAAATTATTG AAGCAGGAGT TTCTTATATT
CCTGAAGATA GGCAGAAGAG AGGGCTTGTC TTAGATTTTG CTTTATATGA AAACCTCATC
CTCGGAAATC ACTATAGAGC TCCTTATAGT AATGGTCTTA ATATGAATTA TAACAAAATA
CGAAAAGAAG TTAGAAATCT AATTAAGGAT TTTGACATAC GGACTCCAGA TGAAGATGTC
AAGGCCAAAT CATTATCAGG TGGTAACCAG CAAAAAGTAA TAATTGCCCG GGAATTTAAT
AGAGAACATG ATTTATTAAT TGCAGCTCAG CCGACCCGTG GGGTAGATGT TGGAGCTATT
GAATTTATTC ATAAACAGAT TATAGAACAA CGTGATTCTG GAAAAGCCGT CCTCCTTATA
TCACTGGAGC TTGACGAGAT TCTTTCCTTA AGTGATAGAA TTGCGGTTAT ATATGAGGGA
GAAATAGTTG ATATTCTTGA TCCTGATGAA GCTACAGAAG AAAAACTGGG TATGCTTATG
GCCGGTGCAA CTACTAACAA TGCCGTGGAA GGGGGAGTGT AA
 
Protein sequence
MNNGDPVIQM NGITKRFPGV VANDKVDFEL KKGEIHALLG ENGAGKTTLM KCLYGLYQPD 
EGDIFINGKK VSISDPNDAI NLGIGMVHQH FMLVPPFTVA ENIVLGSEPV RNYQLDYEKA
VKDVKQLSKR YKLNVDPEAK VQDISVGMQQ RVEILKALYR GADILILDEP TAVLTPQEVD
ELIDIMRSLT EEGKSIIFIT HKLKEVKAIA DRVTVIRRGK LINTVEADSA TSEDLAKMMV
GREVLLRVEK EKANPGEVIL EVSNIKARND RGLMALNGTS FSVRRGEILG IAGVEGNGQS
ELAEVLTGLR EIEDGEIYLK GKNIASYSTR QIIEAGVSYI PEDRQKRGLV LDFALYENLI
LGNHYRAPYS NGLNMNYNKI RKEVRNLIKD FDIRTPDEDV KAKSLSGGNQ QKVIIAREFN
REHDLLIAAQ PTRGVDVGAI EFIHKQIIEQ RDSGKAVLLI SLELDEILSL SDRIAVIYEG
EIVDILDPDE ATEEKLGMLM AGATTNNAVE GGV