Gene Hore_08670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_08670 
Symbol 
ID7314854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand+ 
Start bp933759 
End bp934814 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content37% 
IMG OID643611297 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_002508618 
Protein GI220931710 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.0724448 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAATT ATGGTAAAAT GAATATAGTT ATATTTGAAC TGGAGGGGAG TAATTTGAGT 
AGTTATAATA TTGCAGTTGT TGGAGCAACT GGTGCTGTTG GAAGAGAAAT GGTTAAGGTA 
CTGGAGCAAC GTAATTTTCC GGTAAATAAG TTAAAACTTC TGGCAACCGA ACGGTCAGCC 
GGAACCAGAA TAAATTTTAA GGGTGAAACT ATTGAAGTCC AGGTGACCAG GGAAGGTGTC 
TTTAAGGATG TAGATATTGC CCTTTTCAGT GCCGGTAGTG GACCGAGTAA AAAAATTGCC 
CCACTGGCAG TAAAAGAAGG GGCGGTAGTT ATTGATAATA GCAATGCCTT TAGAATGGAT 
AAGAGAGTAC CCCTGGTAGT ACCAGAGATT AATCCTGAAA AGATTTTTGA ACATGAAGGA 
ATAATTGCTA ACCCCAATTG TTCTACCATA CAAATGGTTG TTGCCTTAAA ACCGATTTAT 
GATACTGTAG GTATAGAACG TATCATAGTT AGCACCTATC AGGCTGTATC CGGTACCGGG 
AAAAAGGCGA TTGAAGAACT AAAAAAACAG GTGAAAGAGT ATATAAAAGG AAAAGATATT 
GAGTCATCTG TATATCCATA CCAGATTGCA TTTAATGTCT TACCACATAT TGATATCTTT 
AAGGAAAATG GGTATACCCA GGAAGAAATG AAAATGGTTA ACGAGACAAG GAAAATACTG 
AATGATCCAG ATTTGAAAGT ATCGGCAACA GCTGCCAGAG TACCTGTTTT TTACGGACAT 
TCAGAATCTG TTAATGTTCA AACAAAAGAA AAAATTACAG TCGATGAGGC TAAAAGAATA 
TTAAATAAAG CTTCCGGGAT AAAGGTTGTA GATGAACCTG GAAGGCTATT ATATCCTCTA 
CCTCTAATGT CTGAAGATGA TGATAATGTA CTGGTCGGAA GAATTAGGGA AGATTTATCA 
CATGAATTGG GTCTTAATAT GTGGATTGTT GCCAATAATT TAAGAAAAGG GGCAGCTTTA 
AATGCTGTCC AGATTGCGGA AGAACTTATT AAATAG
 
Protein sequence
MNNYGKMNIV IFELEGSNLS SYNIAVVGAT GAVGREMVKV LEQRNFPVNK LKLLATERSA 
GTRINFKGET IEVQVTREGV FKDVDIALFS AGSGPSKKIA PLAVKEGAVV IDNSNAFRMD 
KRVPLVVPEI NPEKIFEHEG IIANPNCSTI QMVVALKPIY DTVGIERIIV STYQAVSGTG 
KKAIEELKKQ VKEYIKGKDI ESSVYPYQIA FNVLPHIDIF KENGYTQEEM KMVNETRKIL 
NDPDLKVSAT AARVPVFYGH SESVNVQTKE KITVDEAKRI LNKASGIKVV DEPGRLLYPL 
PLMSEDDDNV LVGRIREDLS HELGLNMWIV ANNLRKGAAL NAVQIAEELI K