Gene Hore_08560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_08560 
Symbol 
ID7314843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand+ 
Start bp920501 
End bp920971 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content43% 
IMG OID643611286 
Product6,7-dimethyl-8-ribityllumazine synthase 
Protein accessionYP_002508607 
Protein GI220931699 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0054] Riboflavin synthase beta-chain 
TIGRFAM ID[TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase 


Plasmid Coverage information

Num covering plasmid clones75 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAATG TTATTGAAGG CCAATTGATT GGTAATGGTA TAAGGGCAGG GATAATAGTC 
AGCCGCTTTA ATGATTTTAT AACTGAAAAA CTATTGGAGG GTGCTCTTGA TGGTTTGAGA 
AGGCATGGTG TTAAAGAGGA AGATATAAGC ATTATAAGGG TTCCCGGTTC CTTTGAAATA 
CCCCTTATTG CTTCAAAAGC AGCCAGGTCA GGCAGATATG ATGGCATAAT CTGCCTGGGT 
GTAGTAATAA GGGGTGAAAC ACCCCATTTT GAATATGTCT CTGCAGAGGT ATCTAAAGGC 
ATAGCCAAGG TTGCCCTTGA TACGGGGGTG CCTGTAATAT TTGCTGTCCT GACTACTGAT 
AACATAGAAC AGGCCATCGC CCGGGCTGGT ACCAAACATG GCAATAAGGG TTTTGATGCT 
GCCCTGTCCC TGATAGAGAT GGTTAACTTG ATGAAGGCAA TGTCTGTTTA A
 
Protein sequence
MRNVIEGQLI GNGIRAGIIV SRFNDFITEK LLEGALDGLR RHGVKEEDIS IIRVPGSFEI 
PLIASKAARS GRYDGIICLG VVIRGETPHF EYVSAEVSKG IAKVALDTGV PVIFAVLTTD 
NIEQAIARAG TKHGNKGFDA ALSLIEMVNL MKAMSV