Gene Hore_08550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_08550 
Symbol 
ID7314842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand+ 
Start bp919212 
End bp920426 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content45% 
IMG OID643611285 
Product3,4-dihydroxy-2-butanone 4-phosphate synthase 
Protein accessionYP_002508606 
Protein GI220931698 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00505] GTP cyclohydrolase II
[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones70 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATAAGA TTGAGGGAGC CCTGGAAGAG CTTAAAGAGG GGAAAATGGT CATAGTAGTT 
GATGATGAAG ACAGGGAGAA TGAAGGGGAC CTGGTAATGG TTGCGGAAAA AGTAAGCCTA 
CAGGCTGTCA ACTTTATGAT AAAAGAGGCC AGGGGCCTGG TCTGTGTTCC CATGGAGGAA 
GAGAGGTTGA AAAGGCTTTC AATCCCTCCC ATGGTCACCT TTAATAATGA TTTGAATGAA 
ACAGCCTTTA CTGTTTCGGT GGATCATAGA GAAACTACCA CCGGTATTTC TGCCCATGAG 
AGGGCCCTTA CGATTAAAAA ATTGATAGAT CCCGCCAGCA CAGCTGAGGA TTTCAGGAGG 
CCGGGCCATG TTTTTCCCCT TGCCGGGAAA AAGGGAGGGG TATTAAAAAG GCCAGGCCAT 
ACCGAAGCTG CCATTGACCT GGCCAGACTG GCCGGCTGCC ATGGGGCAGG AGTCATCTGT 
GAGATAATTA ATGATGATGG AACCATGGCC AGACTGGCAG ATTTAGAGAG ATTTGCCCAT 
CACCATTGTT TAAAAATCAT CAGTATAAGG GATTTGATTA AATACAGGAT GAAAAAAGAA 
AAACTGGTCA AGAGGGTTGC TGAAGCCATG CTACCGACAG TTTTCGGTTC ATTCAAGATT 
ATTGCCTATT TAGATGTTAT AGATGAGAGG GAACACCTTG CACTCATTAA AGGTGATATA 
CGGGGGAGAG AAAAGATTCT CGTAAGGGTG CATTCTGAAT GCCTGACAGG GGATGTCCTT 
TCCTCTCTCC GCTGTGATTG TGGGGAACAG TTGGCCCGTT CTTTAAAGAT GATTGAAAGG 
GCTGGAGCAG GTGTCCTTTT ATATATGCGC CAGGAGGGCA GGGGGATAGG GCTCAGTAAC 
AAGATTAAAG CCTATGCCCT GCAGGAACAG GGGCTGGATA CAGTTGAGGC CAATGAGGTG 
CTGGGTTATC CGGCTGATAT GAGGGATTAT GGCATGGCTG CCCAGATTCT GAAGGATTTA 
GGTTTGAATT CAATAAGGCT GATAACAAAT AATCCAGAAA AAATAAGAGG GCTTGAGGAG 
TATGGCCTTT CTGTAATAGA ACGGATTCCT ATAATAATAA AAGCAAATGA GAAAAACAGG 
TTCTACCTGG AGGTAAAACA AAAGAGGATG GGACATTTGT TGAATATAAT CTGTTCATTA 
ACCTTATTAC CTTAA
 
Protein sequence
MDKIEGALEE LKEGKMVIVV DDEDRENEGD LVMVAEKVSL QAVNFMIKEA RGLVCVPMEE 
ERLKRLSIPP MVTFNNDLNE TAFTVSVDHR ETTTGISAHE RALTIKKLID PASTAEDFRR 
PGHVFPLAGK KGGVLKRPGH TEAAIDLARL AGCHGAGVIC EIINDDGTMA RLADLERFAH 
HHCLKIISIR DLIKYRMKKE KLVKRVAEAM LPTVFGSFKI IAYLDVIDER EHLALIKGDI 
RGREKILVRV HSECLTGDVL SSLRCDCGEQ LARSLKMIER AGAGVLLYMR QEGRGIGLSN 
KIKAYALQEQ GLDTVEANEV LGYPADMRDY GMAAQILKDL GLNSIRLITN NPEKIRGLEE 
YGLSVIERIP IIIKANEKNR FYLEVKQKRM GHLLNIICSL TLLP