Gene Hore_08540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_08540 
Symbol 
ID7314841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand+ 
Start bp918529 
End bp919197 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content41% 
IMG OID643611284 
Productriboflavin synthase, alpha subunit 
Protein accessionYP_002508605 
Protein GI220931697 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0307] Riboflavin synthase alpha chain 
TIGRFAM ID[TIGR00187] riboflavin synthase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones68 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTTTGT TCACCGGAAT CGTCCAGGAA ATCGGGGTAC TCAGAGAAGT AGTCCGGACA 
GGAGGTACTT ATCTTTTTTC CATTACTGCC CGGAGGGTTT TGCAGGACAT TAAGAAGGGA 
GATAGCATAG CCGTTAATGG GGTCTGCCTG ACTGTAATAG ATTTTAACGG AAATAGCTTT 
AATGCTGAAC TTATGCCGGA AACATTAAAG GCCAGTAATC TGGGTGATTT AAAGCCCGGT 
GCATTACTGA ATCTGGAGCA GGCAGTGAGG GCAAAGGATT TTCTCGGAGG CCATATAGTG 
ACCGGCCATG TTGATGGGAT TGGAGTAGTT AAAAGTATCA GGAAAAATAG AAATGCTTAT 
TTAGTGGAAA TTGGGATCAA AAAGGACCTG ACCAGATATC TGGTGGAGAA AGGGTCCATA 
GCAGTAAACG GAGTCAGCCT GACCATAATG GAACTTTATT CTGATTCTTT CCTCATCTCC 
CTGACCAGGG AAACCTGGAA TTCTACTAAT TTACATTGTG TAAAGACAGG GGATAGTTTG 
AATATAGAAA CTGATTTGCT TGGCAAATAT GTCTACAAAA TCCTGAAAAA TTATTTCGGG 
AATAAAGAGT TTGTACCCCA TCATACAACT ATAAACAGGG AATTTTTGAT TGAAAATGGT 
TTTATCTGA
 
Protein sequence
MCLFTGIVQE IGVLREVVRT GGTYLFSITA RRVLQDIKKG DSIAVNGVCL TVIDFNGNSF 
NAELMPETLK ASNLGDLKPG ALLNLEQAVR AKDFLGGHIV TGHVDGIGVV KSIRKNRNAY 
LVEIGIKKDL TRYLVEKGSI AVNGVSLTIM ELYSDSFLIS LTRETWNSTN LHCVKTGDSL 
NIETDLLGKY VYKILKNYFG NKEFVPHHTT INREFLIENG FI