| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_08530 |
|---|
| Symbol | |
|---|
| ID | 7314840 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | + |
|---|
| Start bp | 917406 |
|---|
| End bp | 918521 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 643611283 |
|---|
| Product | diaminohydroxyphosphoribosylaminopyrimidine deaminase;5-amino-6-(5-phosphoribosylamino)uracil reductase |
|---|
| Protein accession | YP_002508604 |
|---|
| Protein GI | 220931696 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
|---|
| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 65 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTGAGAA TACATGCAGA TACCCACCAT TCTTATATGC AGAAAGTCCT CGAACTGGCG
AGAAAGGGAG AGGGGTATAC AGCCCCCAAT CCGCTGGTAG GAGCAATTAT AGTCAGGGAG
GGGGAGATAG TCGGCCAGGG CTTCCATCAG TATTATGGCG GCCCTCATGC GGAAATACTG
GCCCTGGAGG AAGCAGGAGA AAGGGCCAGG GGGGCCACCT TATATGTGAA CCTGGAACCC
TGCTGCCACT ATGGTAAAAC ACCCCCCTGT ACAAAAAAGA TTATAGATTC AGGGGTAAAA
AGGGTTCTGG CAGCAATGTT TGATCCCAAT CCCCTCGTTG CAGGCAAAGG GGTAAAGGAA
TTGCAGGAAA ATGGCATAGA GGTTGAAGTG GGGCTTCTGA GAAAAGAGGC AGAAAGACTG
AATGAAGTTT ATATAAGATA TATTAGTTCA GACCGGCCTT TTGTATATTT AAAATCAGCC
CTTACCCTGG ACGGTTTTAT TGCAACAGTA ACGGGCGACT CCAGATGGAT CAGTAATGAA
AAGGCCCGCC TCTTTGCCCA TACCTTAAGA CATAAGGTAG ATGCCGTCCT GGTGGGGATA
GGGACAATAT TAAAGGATGA TTCTGCCCTC ACTACCCGGC TTCCCGATGG CAGGGGAGAG
GATAGCATAA GGATTATACT GGATCCTGAG CTGAGTATTC CGCCTGATGC CAGGGTTATC
AATCAAAAAT CTAGGAAAAG GACGATCCTA GTTTGTGGAG AGGATTATGA CAACAAAAAG
TATCAGGGGC TTCTCAGGAA AGAGAATCTT GAAATCCTGT CTGTACAATT GAATGAAGAA
GGGAAAATAC CCTTAAAAGC ATTACTGAGG ATACTCCATA AGCAGGGTAT CAGCAGTATT
CTGGTGGAAG GCGGGGGAAG GGTTAATTAC TCCTTTTTAA AGGAAGGCCT GGTTGATAAA
GTTTATTTTT TTATCGCACC TATAATACTA GGTGGCGATG ATGGCATAAG GGTATTTAGT
GGCGAGGGTG TAGCTGATAT TGAAAAAGCA TGGAAATTAA GGGATGTCCA ATATAATTTT
TTTGATGATA ATATTTTAAT CTCAGCCTAT TTATAG
|
|---|
| Protein sequence | MVRIHADTHH SYMQKVLELA RKGEGYTAPN PLVGAIIVRE GEIVGQGFHQ YYGGPHAEIL
ALEEAGERAR GATLYVNLEP CCHYGKTPPC TKKIIDSGVK RVLAAMFDPN PLVAGKGVKE
LQENGIEVEV GLLRKEAERL NEVYIRYISS DRPFVYLKSA LTLDGFIATV TGDSRWISNE
KARLFAHTLR HKVDAVLVGI GTILKDDSAL TTRLPDGRGE DSIRIILDPE LSIPPDARVI
NQKSRKRTIL VCGEDYDNKK YQGLLRKENL EILSVQLNEE GKIPLKALLR ILHKQGISSI
LVEGGGRVNY SFLKEGLVDK VYFFIAPIIL GGDDGIRVFS GEGVADIEKA WKLRDVQYNF
FDDNILISAY L
|
|---|
| |