Gene Hore_08440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_08440 
Symbol 
ID7314831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand+ 
Start bp908363 
End bp908935 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content31% 
IMG OID643611275 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002508596 
Protein GI220931688 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones63 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAC GGGAAAATAA GAAAGAATTA ATCAGAGAGG CAGCAATAAA AGTTATATCA 
AAATTTGGTT TTTATAATAC TACAACTGCC AGTATTGCAG AAGAAGCTGG TGTAGCAGTA 
GGAACAATTT ATAATTATTT CACTAATAAA GAGGAGATAT TGGAATACAT ATTTGCTGTT 
GAATTTGAAA AAAGAATGAG TTATCTAAAA GAGATTGCAC AAGAAGATAG GTCTATATAT 
GAAAAGATAG AATTATTTCT GGAAAAGCAT TTTATGGAGG TAAAAGAAAA CCCCAGTCTG 
GGCAAGATTC TGGTCCGGGA AAAAGATTTT TCCCGAAAAA AGGGCAATAT TGCTATTAAT 
GAATATTTAA ATAAATTACC ACTACTTATT GAGGAGATCT TAAATAAAAG TATAGAAAAG 
AAAGCCATTG AGCCCTGTAA TACATATTTA ATCTCAACAG CTTTATTTGG AGCTATTCAG 
GGAATTGTAG AAAGGGCTGT TGGGGAGGAA GATTTTAATT TGTTTGATCA GGCTGCAGCA 
GAACTTGTAA AAATATTGAA AGAAGGAATA TAA
 
Protein sequence
MKIRENKKEL IREAAIKVIS KFGFYNTTTA SIAEEAGVAV GTIYNYFTNK EEILEYIFAV 
EFEKRMSYLK EIAQEDRSIY EKIELFLEKH FMEVKENPSL GKILVREKDF SRKKGNIAIN 
EYLNKLPLLI EEILNKSIEK KAIEPCNTYL ISTALFGAIQ GIVERAVGEE DFNLFDQAAA 
ELVKILKEGI