| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_08170 |
|---|
| Symbol | |
|---|
| ID | 7314804 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | + |
|---|
| Start bp | 878512 |
|---|
| End bp | 880308 |
|---|
| Gene Length | 1797 bp |
|---|
| Protein Length | 598 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 643611248 |
|---|
| Product | Oligoendopeptidase F |
|---|
| Protein accession | YP_002508569 |
|---|
| Protein GI | 220931661 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1164] Oligoendopeptidase F |
|---|
| TIGRFAM ID | [TIGR00181] oligoendopeptidase F |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAAG AATTACCCGA AAGAAATAAA ATTGATGATA AGTATAAATG GGATTTGGAG
GATATATATA AAACAGATGA AGAGTGGGAA AAAGATTTTA ACAGGGTAAA GGATAAATTA
AAGGATATTG CTACATTCCA GGGCAAGCTG GTTAATTCCA GTCAGAATCT TTTAGACGGG
TTAAATTTAA TTATGGAGGT AGAAGAAGTA GCCACCAGGC TTTATGCTTA TGCCCACATG
AGACAGGACG AGGATACCAG AGACCAGTCT TATCAATCTT TATTTAACCG TGCGCAGAGT
CTACATAATG AGCTGGCCAG TATTACATCC TTCATGGTTC CAGAAATCTT AACCCTGTCC
CGGGAGCAAA TGAATAAATA TCTTGAAGAA AAAGAGGGGT TAAAACTTTA CCGGCATTTA
CTGGATAATA TCCTGCGTCA AAAAGATCAT TACCTTTCTG CAAAAGAAGA AAGGCTAATT
GCAATGGCCG GTGAAGTTAC CCAGGGTCCC TATAATATTT TTAGTATGAT GAATAATGCT
GATCTTACCT TTCCTATAAT TAAAGATGAA AAGGGTGAAG AGGTCAGGGT AACCCATGGC
AGGTTCATTG AACTTATGGA AAATAAAAAC AGAAGAGTCC GTAAAGATGC TTTTAAAGCC
CTTTACAGTA AATATAATGA ATTTATAAAT ACCTTTGCCA GTACCCTGAA TACGGCTGTA
AAAAGCCATA TATATTATGC CAGGGTCCGT AAATATAATT CAGCCCTCGA ATCTGCCCTT
GATGATGATA ATGTTCCAGT TGATGTTTAT AATAATTTAA TTAAAACAAT AAAAGACAAT
CTTAAACCTA TGTATAAATA TATGAAATTA AGAAAAGAGA TCCTTGGTGT TGATGAGCTT
CATATGTATG ATATTTATAC TCCACTGGTT TCTGATCTTG ATATAAAAAT TCCTTATGAG
GAAGCCAAAG AAATGGTTAT TAATGGCCTG AAACCACTGG GGGATGAATA CCTAAATATC
TTGAAGGAAG GTTTTAATTC TGGATGGATT GATGTTTATG AAAATAAGGG AAAAAGGTCA
GGGGCTTATT CATCTGGATG TTACGGGGTA CACCCTTATG TTCTTTTAAA TTATACTGAC
AACCTTGATA ATGTCTTTAC GCTGGCCCAT GAAATGGGGC ATGCTATCCA TACATATTAT
TCAAACAAAA ATCAACCTTT TGTGTATGCT AATTATAAGA TTTTTGTGGC TGAAGTGGCA
TCTACCCTGA ATGAAACATT ACTTATCAAG TATCTCCTTG AGAACACACA AGATGAGAAG
AAGAAAAAAT ATTTAATTAA TCACTATCTG GAACAGTTCC GGGGTACTGT ATACCGCCAG
ACTATGTTCG CTGAGTTTGA AAAGATAATT CATGAAAAAG TAGAACAGGG ACAGCCTTTA
ACTTCTGGAT TATTGAAGGA AATATATAAA AAATTAAATG AGGAATATTA CGGACCTGAT
GTTGTTTCTG ATGAGGAGAT TGCACTGGAA TGGGCCCGTA TACCTCACTT TTACTACAAT
TTCTATGTTT ATAAATACGC AACTGGTTTT TCGGCAGCAA CAGCCCTGGC CAATAAGATT
TTAGAAGAAG GGGATAAGGC AGTTCAAAGA TATATCCAGT TCTTAAAAAG TGGTGATTCT
GATTATCCAT TAAACGTCCT GAAAAAGGCC GGGGTAGATA TGTCGTCACC TGAGCCCATT
GAATCAGCCA TTTCAACCTT TAAAGAATTT GTTGACAGGT TTGAGAAATT AAGTTAA
|
|---|
| Protein sequence | MAKELPERNK IDDKYKWDLE DIYKTDEEWE KDFNRVKDKL KDIATFQGKL VNSSQNLLDG
LNLIMEVEEV ATRLYAYAHM RQDEDTRDQS YQSLFNRAQS LHNELASITS FMVPEILTLS
REQMNKYLEE KEGLKLYRHL LDNILRQKDH YLSAKEERLI AMAGEVTQGP YNIFSMMNNA
DLTFPIIKDE KGEEVRVTHG RFIELMENKN RRVRKDAFKA LYSKYNEFIN TFASTLNTAV
KSHIYYARVR KYNSALESAL DDDNVPVDVY NNLIKTIKDN LKPMYKYMKL RKEILGVDEL
HMYDIYTPLV SDLDIKIPYE EAKEMVINGL KPLGDEYLNI LKEGFNSGWI DVYENKGKRS
GAYSSGCYGV HPYVLLNYTD NLDNVFTLAH EMGHAIHTYY SNKNQPFVYA NYKIFVAEVA
STLNETLLIK YLLENTQDEK KKKYLINHYL EQFRGTVYRQ TMFAEFEKII HEKVEQGQPL
TSGLLKEIYK KLNEEYYGPD VVSDEEIALE WARIPHFYYN FYVYKYATGF SAATALANKI
LEEGDKAVQR YIQFLKSGDS DYPLNVLKKA GVDMSSPEPI ESAISTFKEF VDRFEKLS
|
|---|
| |