Gene Hore_08080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_08080 
Symbol 
ID7314795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand+ 
Start bp868250 
End bp868816 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content40% 
IMG OID643611239 
ProductAppr-1-p processing domain protein 
Protein accessionYP_002508560 
Protein GI220931652 
COG category[R] General function prediction only 
COG ID[COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00000460081 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTAAAA TTGAAATTGA AGGTTCACAA TTAATCCTGG ATACAGGTGA TATTACTCAG 
GAAAGGGTTG AAGCCATTGT TAATGCAGCT AATTCTTCAC TGATGGGTGG AGGAGGTGTT 
GATGGGGCTA TCCACCGGGC TGGTGGTCCT GATATACTTG AGGAATGTAA GGAAATCAGG 
AAAAAAAAGG GTAAACTACC TCCAGGCCAG GCGGTAATAA CTACCGGTGG AAAGCTTAAG 
GCCAGATATG TAATCCATAC CGTTGGTCCT GTCTGGCATG GTGGTCAAAA AAATGAAGGT 
GAAGTCTTAA AACAGGCATA CAGGAACTGT TTAGACCTGG CGAGAAAAAA CGGGATCAGG 
TCTATTGCCT TTCCATCCAT CAGTACTGGA GCTTATAGAT TTCCGGTTGA CAGGGCAGCC 
GGTATTGCGA TAGATACAAT TTATACATAT CTTTCAAAAT ACAAAGGGGT ATTCGAGAAG 
GTTAAAATGG TTTTATACAC TGAAGCTGAT TATAACATAT ATGTCTCCAA ATATAATAAA 
ATTATCCATA AATCTGATCA ACAATAA
 
Protein sequence
MVKIEIEGSQ LILDTGDITQ ERVEAIVNAA NSSLMGGGGV DGAIHRAGGP DILEECKEIR 
KKKGKLPPGQ AVITTGGKLK ARYVIHTVGP VWHGGQKNEG EVLKQAYRNC LDLARKNGIR 
SIAFPSISTG AYRFPVDRAA GIAIDTIYTY LSKYKGVFEK VKMVLYTEAD YNIYVSKYNK 
IIHKSDQQ